Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan6g1205 | ATGAATAATAATTATCAAGGGGCTCTCATGGGTATTCCACAAACTCCAAACCCTTCTCCTTCACATCTATATCCAAGGGAAATTCAGCTTAAACTTTACCAAGCTTTCATATTTTCAATCCCAATACTCTTCACAATTATTCTAGTTCTCTTGTTTTACTTATTCTACCTCAAGAGGAGGGCTTCATTTCTCTCATCCACTCCTCTTCACATACTTCCTAGGAGGTCCAATCCTCAAACTACATATCCTTATACTTCTTCGCCTTATCGTTTAGATCATCTCACGGTACAATTTCTGGACAAACTTCCAAGAGTTTTATGTGATGAGGATTTGAGAGCAAGGGATTCCTTATGTTGTGTTTGTCTTGGAGAATTTGAGCTGAAAGAAGAGCTGCTTCAGATTCCTTATTGCAAGCACGTGTTTCACATAGAATGTATACATAACTGGCTCCAATCAAACACTACATGCCCATTATGTAGATGTTCCATCATCACCACCAACACTACCAAGTTCCTTAATCCTGCACCATCTATTGATTCATTAGACCCACCACAACAAAGTGGTGTCATTTCTGGCTCTCCATCACACATCACATCATTGCCTCCTCAACTAGAAGATGAAGCAACTACTTCAAATATTTTCAGGGAATGA | 651 | 0.3902 | MNNNYQGALMGIPQTPNPSPSHLYPREIQLKLYQAFIFSIPILFTIILVLLFYLFYLKRRASFLSSTPLHILPRRSNPQTTYPYTSSPYRLDHLTVQFLDKLPRVLCDEDLRARDSLCCVCLGEFELKEELLQIPYCKHVFHIECIHNWLQSNTTCPLCRCSIITTNTTKFLNPAPSIDSLDPPQQSGVISGSPSHITSLPPQLEDEATTSNIFRE* | 217 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan6g1205 | 216 | ProSiteProfiles | Zinc finger RING-type profile. | 118 | 160 | IPR001841 | - | |
Lan6g1205 | 216 | MobiDBLite | consensus disorder prediction | 182 | 202 | - | - | |
Lan6g1205 | 216 | PANTHER | RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING | 12 | 171 | - | - | |
Lan6g1205 | 216 | SMART | ring_2 | 118 | 159 | IPR001841 | - | |
Lan6g1205 | 216 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 85 | 165 | IPR013083 | - | |
Lan6g1205 | 216 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RHA4A-RELATED | 12 | 171 | - | - | |
Lan6g1205 | 216 | SUPERFAMILY | RING/U-box | 96 | 166 | - | - | |
Lan6g1205 | 216 | Pfam | Ring finger domain | 118 | 160 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan6g1205 | Lan-Chr6 | 12155170 | 12158176 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan6g1205 | 12 | 179 | C3H Transcription Factor Family | AT4G10150 | 40.230 | 1.08e-32 | 116 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan17g1180 | 17 | 19996142 | 20000576 | Lan6g1205 | 6 | 12155170 | 12158176 | LSH | |
Lan18g0159 | 18 | 1315889 | 1318080 | Lan6g1205 | 6 | 12155170 | 12158176 | LSH |