Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1195 ATGGACGGTGTGTCAAAATTCCATGGAATGATAGACCTGAACAAGCATAATAACTATTATGATGTCTCTGAAGGTTTTTACCATAAGCTCGGGGAGGGTACCAATATGTCACTTGACAGCATTGGGAGCTTGCAAACAGGTAACGACGGAGGATCTGTTGCGATGTCTGTTGATAATAGCAGTGTTGGGTCCAATGATTCCCATACCCGCATGTTGGATCACCAAGGATTGAAGAGGCGTGCCAATGATAACTACTCTGTTGCACACAGTGTCAATCATCGAGGAGGAGTCATACATGCTTTAAGCGATGATGCTTTGGCTCGAGCTCTTATGGACAATAGTTCTCCAACTGAGGGTCTTGACAATTTCCATGAGTGGACAATTGATTTGAAGAAGCTTAATATGGGTGAGGCTTTTGCGCAAGGAGCTTTTGGGAAACTCTATAGGGGTACTTACAATAATGAAGATGTTGCTATCAAAATCTTGGAGAGGCCAGAAAATGATCCATCAAAGGCTCAATTGATGGAACAGCAGTTTCAGGCTGAGGTCATGATGCTGGCTACGCTAAAGCATCCTAACATAGTCCGTTTCATTGGTGCGTGCCATAAGCCAATGGTATGGTGCATTGTAACTGAGTATGCCAAAGGTGGTTCAGTTCGACAGTTTTTAAGGAAGCGTCAAAACCGATCAGTACCTCTCAAATTGGCTGTCAAACAAGCTTTGGATGTTGCAAGGGGAATGGCATATGTTCATGGCCTTGGATTGATACACAGGGACTTGAAATCTGATAATCTTTTGATTTTTGGTGACAAATCTATTAAAATTGCGGACTTTGGAGTTGCCAGGATTGAAGTGCAAACTGAAGGAATGACACCTGAAACTGGAACATACCGTTGGATGGCTCCGGAGATGATCCAGCATAGGCCCTACACTCAAAAGGTGGATATATATAGCTTTGGGATTGTTCTATGGGAACTCATCACTGGAATGCTTCCATTTCAGAACATGACAGCAGTACAGGCAGCATTCGCAGTTGTCAACAGAAATGTTCGCCCAATTGTACCCAATGATTGCTTGCCTATTCTCGGCGAGATCATGACAAGATGCTGGGATCCCAACCCTGATGTTAGACCACCGTTTCCTCAAATTGTAGGAATGCTAGAGAGTGCGGAGACTGAGATCTTGACAACAGTGCGGAAGGCTCGTTTCAGGTGTTGCATCGCCCAACCGATGACTGCTGACTGA 1245 0.445 MDGVSKFHGMIDLNKHNNYYDVSEGFYHKLGEGTNMSLDSIGSLQTGNDGGSVAMSVDNSSVGSNDSHTRMLDHQGLKRRANDNYSVAHSVNHRGGVIHALSDDALARALMDNSSPTEGLDNFHEWTIDLKKLNMGEAFAQGAFGKLYRGTYNNEDVAIKILERPENDPSKAQLMEQQFQAEVMMLATLKHPNIVRFIGACHKPMVWCIVTEYAKGGSVRQFLRKRQNRSVPLKLAVKQALDVARGMAYVHGLGLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDIYSFGIVLWELITGMLPFQNMTAVQAAFAVVNRNVRPIVPNDCLPILGEIMTRCWDPNPDVRPPFPQIVGMLESAETEILTTVRKARFRCCIAQPMTAD* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1195 414 ProSiteProfiles Protein kinase domain profile. 133 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1195 414 Gene3D Transferase(Phosphotransferase) domain 1 216 404 - -
Lan6g1195 414 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 5 405 - -
Lan6g1195 414 CDD STKc_MAP3K-like 140 387 - -
Lan6g1195 414 SUPERFAMILY Protein kinase-like (PK-like) 118 387 IPR011009 -
Lan6g1195 414 Gene3D Phosphorylase Kinase; domain 1 122 215 - -
Lan6g1195 414 Pfam Protein tyrosine and serine/threonine kinase 134 386 IPR001245 GO:0004672|GO:0006468
Lan6g1195 414 PANTHER SERINE-THREONINE PROTEIN KINASE 5 405 - -
Lan6g1195 414 SMART serkin_6 133 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1195 414 PRINTS Tyrosine kinase catalytic domain signature 211 224 IPR001245 GO:0004672|GO:0006468
Lan6g1195 414 PRINTS Tyrosine kinase catalytic domain signature 249 267 IPR001245 GO:0004672|GO:0006468
Lan6g1195 414 PRINTS Tyrosine kinase catalytic domain signature 295 305 IPR001245 GO:0004672|GO:0006468
Lan6g1195 414 PRINTS Tyrosine kinase catalytic domain signature 314 336 IPR001245 GO:0004672|GO:0006468
Lan6g1195 414 PRINTS Tyrosine kinase catalytic domain signature 358 380 IPR001245 GO:0004672|GO:0006468
Lan6g1195 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1195 Lan-Chr6 12033060 12040193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1195 23 414 MAP Kinase Kinase Kinase AT2G24360 77.551 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lan6g1195 PK_Tyr_Ser-Thr 1.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1195 - - gmx:100788536 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0707 17 6311449 6315338 Lan6g1195 6 12033060 12040193 LSH