Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1186 ATGTCAAGGACAAATTCTGAGAAGAAATTGGGTGCAGGAAGAGTTGTGGCTGTGGCAATTGAAAACAACAAAACAAGTCAATATGCTGCAAAATGGGCAGTTGATAATCTTCTTCCAAAAGACCAATGTTTGTTATTAATCCATGTTAGACAAAGAGCATCATCAATTGCTACACCAACAGGAAGCCAGATATCCCTTGATGCTAACGACGATGTGGCTAGAGCATACAAGCAACAAATGTACAATGAGTCGAGAGAGCTTTTCGCTACATTTCGCGTCTTCTGCAATAGAAAGAATATACAATGCCAAGAGATCTTGTTGGAGGACACAGATGTACATAAGGCATTAATGGAAAGTATTAACACATATTCCATTGAGCTTATGGTACTTGGGGCACCATCAAAAAGTGGTCTTGTTAGGAGGTTTAGAACAACAGATGTCCCAAACCAAGTGTCAAAAGGGGCACCACCATTCTGCACTGTGTACATTATTTCCAAAGGAAAAATCTCAACTGTCAAATCTGCTACTGCTTCACTAACTACTACTTCTAAAGCTACAATCCTTAGCAATACATTGCAACCACAGAATCAACTTGCACCTAGTCTTGACATAATGGATGCACAACACATGCAAAACCATCCACCACGACCAATAACAGAGAAACCAACATATGGTGCACCACGACTATCATCGGAGGACGAAATCAAATCGCCGTTCACAAGATCTAGTAAATCATACCACAGATCTTTTGAATCCTCGGTTCCGGATTCTGATATATCATTCGTGAGCAATGGAAGGCCAAGCGTTGACAGGATGTTCCCTTCATTTTATGATGAAATGGACTCTGGAAGGCTTTCATCAGGCTCAGATTTGGATGCCAGAAGCTACAGTTCATCGCTCTCGGGTGCTAAGTCGATTGATCAGGGTGACTACTCGTTCTGTTCACAAGACAGTGGTTTCTCAACACCATCTGCGAGGTTCTCAAGTTCGGATGATGTAGAAGCTGAAATGAGGAGACTCAAGTTAGAACTGAAGCAGACTATGGAAATGTATAGTACAGCTTGCAAGGAAGCTCTCACAGCAAAGCAAAAGGAAATGGAACTTCAGCGTTGGAAATTGGAAGAACAAAGGAAAACCGAAGAGTTACGAATGACCGAAGAAGCAGCATTGACGGTAGCCGAGAAGGAGAAAATAAAAGCTAATGCCGCAATGGAGGCAGCAGAAGCAAATCAGAAAATTATAGAGTTTGAAGTACAACAAAGAATGAAAATAGAATCTGATCAGAAGAACAAGGCAGATGATACTATTTCATATAGTCCTGTCCGGTATAGAAAATACAGTATTGAGGAGATTGAAGAAGCAACAAACAACTTTGATATCTCTCTCAAGGTTGGTGAAGGAGGTTATGGGCCAGTGTTTCGGTGTGAACTAGATCACACACCAGTTGCAATTAAAGTGCTTAAGCCAGATGCAGCTCAAGGAAGGTCACAGTTTCAGCAAGAGGTTGAAGTGTTAAGTTCCATGAGGCATCCAAACATGGTTCTCCTCCTTGGAGCTTGTCCGGAGTATGGTTGCCTAGTGTACGAGTACATGGCTAATGGAAGCTTGGATGACTGCCTCTTCAGGAGAGGTAAGGTACCAGCTCTTCCTTGGCAACTAAGATTCAGAATTGCTGCAGAAATTGCTACAGGCCTCAATTTCCTCCATCAAGCAAAGCCAAAACCACTGGTGCATCGTGACTTAAAACCTGGAAACATCTTGCTCGACCGCAACTTCGTGAGCAAGATCAGTGATGTTGGATTGGCCAGGCTTGTCCCTCCTTCAGTTGCAGACACTGTAACACAATATCGCATGACATCAACTGCCGGAACATTCTGTTACATTGATCCCGAGTACCAGCAAACAGGCATGCTAGGAATCAAGTCTGATGTATACTCGCTTGGGATCATGCTGCTACAGATTATAACAGCCAAGCCACCAATGGGTTTGACTCATCATGTTGGAAGAGCTATTGAGAAAGGTACTTTTGCTGAAATGCTTGACCCTGCTATTGAGGAGTGGCCAGTTGAACATGCTATGCATTTTGCTAAGCTTGCATTGCAGTGTGCCGAAATGAGAAGAAAAGATAGGCCTGATCTCGGGAAAGTTGTATTGCCCGAGCTCAATAAGCTCAGAGATTTTGCTGAAGAAAACTTGCCTATGATGATGATGTTTGGTGCAGGATTCACTACTAGAACTAACAATTACTCGCGCTCGACAATTTCCTCGTCCACAGTGAGTCGTTGTGCATATCACACCTTGTTTTTTCAGTTCATATTATGTAGTCATACTTTTTTTCAGTTCATACTATATAGTCATAACAATTTATATCACATATTTCTCTTGTAG 2388 0.4221 MSRTNSEKKLGAGRVVAVAIENNKTSQYAAKWAVDNLLPKDQCLLLIHVRQRASSIATPTGSQISLDANDDVARAYKQQMYNESRELFATFRVFCNRKNIQCQEILLEDTDVHKALMESINTYSIELMVLGAPSKSGLVRRFRTTDVPNQVSKGAPPFCTVYIISKGKISTVKSATASLTTTSKATILSNTLQPQNQLAPSLDIMDAQHMQNHPPRPITEKPTYGAPRLSSEDEIKSPFTRSSKSYHRSFESSVPDSDISFVSNGRPSVDRMFPSFYDEMDSGRLSSGSDLDARSYSSSLSGAKSIDQGDYSFCSQDSGFSTPSARFSSSDDVEAEMRRLKLELKQTMEMYSTACKEALTAKQKEMELQRWKLEEQRKTEELRMTEEAALTVAEKEKIKANAAMEAAEANQKIIEFEVQQRMKIESDQKNKADDTISYSPVRYRKYSIEEIEEATNNFDISLKVGEGGYGPVFRCELDHTPVAIKVLKPDAAQGRSQFQQEVEVLSSMRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRGKVPALPWQLRFRIAAEIATGLNFLHQAKPKPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDVYSLGIMLLQIITAKPPMGLTHHVGRAIEKGTFAEMLDPAIEEWPVEHAMHFAKLALQCAEMRRKDRPDLGKVVLPELNKLRDFAEENLPMMMMFGAGFTTRTNNYSRSTISSSTVSRCAYHTLFFQFILCSHTFFQFILYSHNNLYHIFLL* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1186 795 MobiDBLite consensus disorder prediction 284 304 - -
Lan6g1186 795 Gene3D Phosphorylase Kinase; domain 1 437 530 - -
Lan6g1186 795 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 156 - -
Lan6g1186 795 SMART serkin_6 458 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1186 795 Pfam Protein kinase domain 462 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1186 795 Gene3D Transferase(Phosphotransferase) domain 1 531 735 - -
Lan6g1186 795 Coils Coil 356 388 - -
Lan6g1186 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 576 588 IPR008271 GO:0004672|GO:0006468
Lan6g1186 795 PANTHER OS02G0152300 PROTEIN 1 759 - -
Lan6g1186 795 SUPERFAMILY Protein kinase-like (PK-like) 435 717 IPR011009 -
Lan6g1186 795 Coils Coil 330 350 - -
Lan6g1186 795 CDD STK_N 15 167 - -
Lan6g1186 795 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 1 759 - -
Lan6g1186 795 MobiDBLite consensus disorder prediction 215 250 - -
Lan6g1186 795 ProSiteProfiles Protein kinase domain profile. 458 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1186 795 Gene3D HUPs 14 164 IPR014729 -
Lan6g1186 795 Pfam Universal stress protein family 14 156 IPR006016 -
Lan6g1186 795 Coils Coil 390 419 - -
Lan6g1186 795 MobiDBLite consensus disorder prediction 288 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1186 Lan-Chr6 11950955 11955710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1186 16 732 Receptor kinase-like Gene Family AT5G35380 57.282 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lan6g1186 Pkinase 3.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1186 - - gmx:100803837 1115.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1186 6 11950955 11955710 Lan6g1186 6 11950955 11955710 ECH
Lan17g1158 17 19438170 19442203 Lan6g1186 6 11950955 11955710 LSH