Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1183 ATGGAGAGAGGAAATGGAACAACGTGTAAGCAATTTCCATCTCATGGCGGAAAAAGCTTAGTGACAGTTGCTGCTATTAGGAAGAAACATTTACAGAAAGAGATGAATGTTGTTGTTAATGCAACTTCTTCGTATTCTGGAAAGAGTAAAAAACGTAACGGTTTTCAGGAAGAGTTATTAACAGAAGATTATATTGCAAACAACGTTTTTCGTAATGATGGTCCTGCTCTTGGTCACGATTTTGACTTTCTTCCGTCTGGGCCCAAAGATTATACTCCTGCTTGTCCAGAAAACCAAAAACCCACTAAAAGGAAGAAGGTTTACAAGAGTGCAATAGTGAGTCATCCTGATTGTAACATGGAAGCACCTGTGAAGAAGCATGGTGTTGGCAAGGGTTTGATGACAGTCTGGATGGCAACAAATCCTGATGCTAGGGACCTTCCAATTGGATATGGTTTGGTCGACCAGGAAGTTCGTCTAACCTCAAATTCTATTCTACATAAACCAGTATGTGATAAAAAGAGCTCTCGGAAAACAGTAACCATGAGTGGAATGCGAAAAGGTAAAATGCTGAATAAGAAAAATAAATTACAGGATAAGAGGAATTTCGCCATTCAAAGAAGAGTGGAGGAATCTAGCCAATATGTGAGAGAAATCCATCTACCGAAGGAAAAATGTGATCTTGCTTTGGATAGTGCAATATCTACAGAGAGAGTTGATTGGATTTCGACGCTAATTGATGATGAAGAGCTAGAGATGATAGATTTACAGGCTGGGTCTGACCTGCTTATGTGTTCTGATCATCTTGCTACCAGTGGAATACTTGGCTGCTCACTTTGTAAAGATGTGCTAGTTAAATTCCCCCCAGATACTGTCAAGATGAAGAAACCTATCTGTTTGCAACCTTGGGACTCCTCTCCAGAAATTGTGAAGAAATTATTTAAGGTTTTTCATTTCCTATATACTTATGCTATAGTTGTTGATACATGCCCCTTCACTCTTGATGAGTTTGTTCAAGCATTTCATGATAAGTACTCAATGTTACTTGGAAAGATTCATGTGGCCCTTCTTATGGTTCTTCTATCTGACATTGAAATGGAGCTTACTAATGGGTTTTCACCCCATTTAAATAAGTCATGCAACTTTCTTGCACTGGTTCACTCGGTCGAAAGTCAAGAATATTCCTTGAATTTCTGGAGAAAATCTCTTAATTCTCTTACTTGGATTGAAATACTCCGTCAAGTGCTAGTTGCTTCTGGATTTGGTTCAAAGCAAGGTGCCTTACGGAGGGAGACCCTTAACAAGGAACTGAATCTTTTTGTAAACTATGGCTTACGTCCTGCAACCTTGAAGGGTGAGTTGTTTAAGATCTTGTTAGAGCGAGGAAACATTGGATGCAAAGTATCTGAGCTATCGAAGTCAATGCAGATTGCAGAACTAAACCTTGTCAGAACAACAGATGAGCTGGAGTCCTTAATATGCTCGACACTTTCTAGTGATGTTACTTTATTTGAAAAGATCTCATCATCAGCATATCGGTTGCGAATGAGCACTGTTACAAAGGAGAATGATGAATTGGAGTCAGATATGGAGGGCTCTGGGAGTGTTGATGATGAACTCAATGACAGTGATACTTGTAGCAGTGGTGATGATTTTGAAAATGATTTAAGAATCACCAATATAAGAAAACTGAAGTGTGCAAACAGTCACAAAATTAAAAACAATATGCTGAAAGTTTACAATGAAATTGATGAGAGCCATCCAGGGGAAGTGTGGCTGTTAGGACTTATGGAAAGTGAGTATTCAGATTTGAACATTGAAGAAAAATTGAATGCATTGGTGGCTCTAACTGATCTTCTTTCATCTGGATCCAGCATCAGGGTGAAGGATAAAATGAAAATTACAGCTGATCGCAGTTCTAGCATCCAATTACGTGGTTCAGGAGCAAAAATAAAGAGATCAGTAGTAAAGAACCCCAGGCCAGTTTGGAACCAGACTGCACAAATGCAATGTGCTAAAGAAGCACATTCTATTTTTCATCCCAATCCAGTAGATTCCTCATCATTAATCTCAAATGTCCATAATCATGAGGGTTCCTCTGAGAAGGGAATAGATTCAACTGATTCACACCCCATTCAATCAGTGTTTTTGGGATCTGATCGTAGGTACAATAGATACTGGCTTTTTTTGGGCCCTTGTAATGCAGATGATCCTGGCCATAGAAGGGTTTACTTTGAATCTTCTGAAGATGGCCACTGGGAGGTGATTGATACTGAAGAGGCCTTGTGTGCCTTGGTATCAGTTCTAGATGATCGGGGGAAACGGGAGGCTCTTCTTATTGAATCTTTGGAGAGACGACAAGCATCTCTATGCAGATCTATGTCTAGGATTAAGGTTAATAGTACTGGAATGAGGTGTATGTCACATTCTGATCAATCTGAGCTGGATATAATCACAGAAGACAGTTTCTCTCCTATATCTGATGTAGACAATCTGAACATGACTGAGACTGCCGAAGACTCTTTGCCTTCAACTGGGGCTGTGGTAATTGCAGCTGGAAAGAAGGGAGAGGAGAAAGTGCAAAAATGGCTCTGCATGCAACAATATGATTCTTGGATTTGGAGTTCCTTTTATTTAGATCTCAATGTTGTTAAATATGGTAGAAGGTCGTATCTTGACTCTCTAGCCAGATGTAAGAGTTGTCACGATCTATACTGGAGAGACGAGAGACACTGCAAAATTTGCCATTTGACATTTGAACTTGATTTTGATCTAGAAGAAAGATATGCAATCCACATAGCCACATGCAGGGAGAAAGAAGACAGCAGTGTATTTCCAAATCATAAAGTATTGTCATCACAGATTCAATCACTGAAAGCTGCAATTTATGATATTGAGTCTGTTATGCCTGAAGATGCCCTGGTGGGTGCTTGGAGGAAGTCTGCTCATAAGTTATGGGTCAAACGGCTCAGACGCACCTCAACTTTAGTGGAGCTTTTTCAGGTCCTTACTGATTTTGTTGATGCTATCAATGAGGACTGGTTGTTTCAATGCCACTTTCCTGATGGTGTGGTTGAAGAAATCATTTCATCTTTTGCATCTATGCCTCATACATCATCTGCACTTGCCCTGTGGTTAGTGAAGTTAGATATCATAATTGCTCCTTACCTGGTCCGACATCAGCATCAGAAGAAGCACTGA 3201 0.3989 MERGNGTTCKQFPSHGGKSLVTVAAIRKKHLQKEMNVVVNATSSYSGKSKKRNGFQEELLTEDYIANNVFRNDGPALGHDFDFLPSGPKDYTPACPENQKPTKRKKVYKSAIVSHPDCNMEAPVKKHGVGKGLMTVWMATNPDARDLPIGYGLVDQEVRLTSNSILHKPVCDKKSSRKTVTMSGMRKGKMLNKKNKLQDKRNFAIQRRVEESSQYVREIHLPKEKCDLALDSAISTERVDWISTLIDDEELEMIDLQAGSDLLMCSDHLATSGILGCSLCKDVLVKFPPDTVKMKKPICLQPWDSSPEIVKKLFKVFHFLYTYAIVVDTCPFTLDEFVQAFHDKYSMLLGKIHVALLMVLLSDIEMELTNGFSPHLNKSCNFLALVHSVESQEYSLNFWRKSLNSLTWIEILRQVLVASGFGSKQGALRRETLNKELNLFVNYGLRPATLKGELFKILLERGNIGCKVSELSKSMQIAELNLVRTTDELESLICSTLSSDVTLFEKISSSAYRLRMSTVTKENDELESDMEGSGSVDDELNDSDTCSSGDDFENDLRITNIRKLKCANSHKIKNNMLKVYNEIDESHPGEVWLLGLMESEYSDLNIEEKLNALVALTDLLSSGSSIRVKDKMKITADRSSSIQLRGSGAKIKRSVVKNPRPVWNQTAQMQCAKEAHSIFHPNPVDSSSLISNVHNHEGSSEKGIDSTDSHPIQSVFLGSDRRYNRYWLFLGPCNADDPGHRRVYFESSEDGHWEVIDTEEALCALVSVLDDRGKREALLIESLERRQASLCRSMSRIKVNSTGMRCMSHSDQSELDIITEDSFSPISDVDNLNMTETAEDSLPSTGAVVIAAGKKGEEKVQKWLCMQQYDSWIWSSFYLDLNVVKYGRRSYLDSLARCKSCHDLYWRDERHCKICHLTFELDFDLEERYAIHIATCREKEDSSVFPNHKVLSSQIQSLKAAIYDIESVMPEDALVGAWRKSAHKLWVKRLRRTSTLVELFQVLTDFVDAINEDWLFQCHFPDGVVEEIISSFASMPHTSSALALWLVKLDIIIAPYLVRHQHQKKH* 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1183 1066 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 42 1063 IPR044977 GO:0006357
Lan6g1183 1066 MobiDBLite consensus disorder prediction 522 544 - -
Lan6g1183 1066 ProSiteProfiles DDT domain profile. 307 366 IPR018501 -
Lan6g1183 1066 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 588 627 IPR028942 -
Lan6g1183 1066 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 713 786 IPR028941 -
Lan6g1183 1066 PANTHER OS07G0619600 PROTEIN 42 1063 - -
Lan6g1183 1066 SMART testlast3 307 366 IPR018501 -
Lan6g1183 1066 Pfam DDT domain 310 363 IPR018501 -
Lan6g1183 1066 MobiDBLite consensus disorder prediction 529 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1183 Lan-Chr6 11912950 11923778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1183 205 1053 Homeobox Transcription Factor Family AT1G28420 25.955 4.66e-70 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Lan6g1183 WSD 2.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1183 - - aprc:113853612 1621.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g1156 17 19390381 19402229 Lan6g1183 6 11912950 11923778 LSH