Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1179 ATGGCGGGTGCGATGAAGAAGGTGGACAAGATTCGTCAAATGGCGTATCTCAAAGATTTTCTCATACGGTGGAAGCGAATCAGCCTTCGTCGTCGCACCTTAAACGACGCCGTTTCATCACCACGCGCTCCGTCAGGGTCTCTCTTCGTCTACGTTGGAACAGAACGCAAGCGTTTTGTTATCCCAACGCGGTTCCTGAACCTTCCAATTTTCGCGTGTCTCCTCAAAGAAACGGAAGAGGAGTTTGGGTTTACGTGCAACGGTGGTTTGGTTTTGCCATGTGAAGTAGGGTTCTTCAACGACGTCGTTAAGTGCCTTCGCAAAGATGAGAAAAAATATGGGAAATTTTCTGTGCAGGATTTTGTGAGTATGAACTCTGATGCGGGTTTTGATTATTGCAAGGAAAAGATGATGCCTTTCACTCCTCTTTTGCAAAACACAAGAGGTTTGACCATTCTTTAG 462 0.461 MAGAMKKVDKIRQMAYLKDFLIRWKRISLRRRTLNDAVSSPRAPSGSLFVYVGTERKRFVIPTRFLNLPIFACLLKETEEEFGFTCNGGLVLPCEVGFFNDVVKCLRKDEKKYGKFSVQDFVSMNSDAGFDYCKEKMMPFTPLLQNTRGLTIL* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1179 153 Pfam Auxin responsive protein 12 106 IPR003676 GO:0009733
Lan6g1179 153 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 139 IPR003676 GO:0009733
Lan6g1179 153 PANTHER - 2 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1179 Lan-Chr6 11876514 11877036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1179 5 110 Calmodulin-binding Proteins AT4G34750 35.849 1.97e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1179 K14488 - lang:109332636 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0144 18 1158095 1158780 Lan6g1179 6 11876514 11877036 LSH