Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1164 ATGGTTGACACCAAGAGTAGAAAGGAAGAGGTTGTTACCAGAGAGTACACCATCAACCTCCACAAACGCTTACATGGCTGCACATTCAAAAAGAAGGCTCCCAAAGCAATCAAGGAGATAAGGAAGTTTGCCCAGAAAGCCATGGGGACAAATGATGTGAGAGTGGATGTGAAACTGAACAAGTATGTGTGGAGCCAGGGGATCCGAAGTGTCCCTAGGAGGATCCGGGTACGCATTGCACGCAAGAGAAACGATGATGAGGATGCAAAGGAAGAGCTCTACTCCCTTGTTACAGTGGTTGAAATCCCCAAGGATGAGCTCAAAGGTTTGGGGACAAAGGTTATTGATGATGAAGATTGA 360 0.4667 MVDTKSRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTNDVRVDVKLNKYVWSQGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVVEIPKDELKGLGTKVIDDED* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1164 119 Gene3D - 7 119 IPR023621 -
Lan6g1164 119 CDD Ribosomal_L31e 8 91 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lan6g1164 119 ProSitePatterns Ribosomal protein L31e signature. 53 67 IPR020052 GO:0003735|GO:0005840|GO:0006412
Lan6g1164 119 SMART Ribosomal_L31e_2 9 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lan6g1164 119 Pfam Ribosomal protein L31e 10 91 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lan6g1164 119 PANTHER 60S RIBOSOMAL PROTEIN L31 5 119 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lan6g1164 119 PANTHER OS06G0319700 PROTEIN 5 119 - -
Lan6g1164 119 SUPERFAMILY Ribosomal protein L31e 10 91 IPR023621 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1164 Lan-Chr6 11733520 11736671 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1164 1 119 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 78.992 2.74e-67 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1164 K02910 - gmx:100810835 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1164 6 11733520 11736671 Lan6g1164 6 11733520 11736671 ECH