Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1155 ATGAATATGATCAGCAACTTGAGCTGTGTTAGCAGTTCCAATCTCATAGATACCAAGCTTGAAGAGCATCAATTGTGTGGATCCAAACAGTGCCCAGGTTGTGGACACAAGTTTCAAGGAAAACCGGACTGGCTAGGTCTACCTGCAGGAGTAAAGTTTGATCCAACAGACCAAGAACTCATAGAACATCTTGAAGCTAAAGTTGTGGCAAAAAACATGAAGTCACATCCCTTGATAGATGTTTTCATTCCTACTATTGAAGGAGATGATGGCATTTGTTACACCCATCCTGAGAAACTTCCAGGAATAACAAAAGATGGGTTGAGCAGACACTTTTTCCATAGACCCTCAAAGGCTTATACAACAGGAACAAGAAAGAGAAGAAAGATTCAAAACGAATGTGAAAACTTGCATGGAGGAGGAGAAACAAGGTGGCACAAAACAGGTAAAACAAGACCAGTAATGGTTAATGGAAAACAAAAAGGGTGCAAGAAAATTCTAGTCCTCTATACAAATTTTGGGAAGAACAGAAAACCTGAGAAAACAAATTGGGTTATGCACCAATACCATTTGGGAATGCATGAAGAAGAGAAAGAAGGAGAGCTTGTTGTGTCAAAAATATTCTATCAGACACAGCCTAGGCAGTGCAATTGGTCTCATGATAGAATTGGAAGTGGAGAACAACCTAGTTATAACAATGGAAGAAGAGACAGTGGAAGTGGGAGTTGTTCTTCTAAGGAAATAGTTACTTTTAGAGATGAAATGTCTGATGTTGTTTGTGTCCCTCCAAATTCAAGCTTCAATGATGTTATGGACATTCAACACCTAAAATCTGACCATTTCAGCTTCATCCCCTTCAGAAAAGGCTTCCAAGAGGTTGGAATAGGAGAATCTTCCACAAGAGAATGCAATGAATTACATGATCATCAGCTACAACAACATCAACAAGCAGCTTTCCACATGAACATGCCTTCACATCCCATTTCCACATTAATCTCTCCAACTCCCCTTCACCAAACATCCATCACCCTTCAGGACAACTCTTACCATGTCTCTACAATAATGCTACAAAATGCAAATTTCCAGCATCAGCAACAACATAAGCTAGGAGGAAGGTCTATGTCCGGATTGGAGGAACTAATTATGGGGTGCACTTCAACTGATACTAGAGAGTTCCCTTTGCAGGAGTCATCCATCACAAACCCACAAATAGAAGCTGAATGGTTAAAGTACTCATCTTACTGGCATGTCGACCCTGACAACCCAAATCATCATGGGTAG 1281 0.4044 MNMISNLSCVSSSNLIDTKLEEHQLCGSKQCPGCGHKFQGKPDWLGLPAGVKFDPTDQELIEHLEAKVVAKNMKSHPLIDVFIPTIEGDDGICYTHPEKLPGITKDGLSRHFFHRPSKAYTTGTRKRRKIQNECENLHGGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGMHEEEKEGELVVSKIFYQTQPRQCNWSHDRIGSGEQPSYNNGRRDSGSGSCSSKEIVTFRDEMSDVVCVPPNSSFNDVMDIQHLKSDHFSFIPFRKGFQEVGIGESSTRECNELHDHQLQQHQQAAFHMNMPSHPISTLISPTPLHQTSITLQDNSYHVSTIMLQNANFQHQQQHKLGGRSMSGLEELIMGCTSTDTREFPLQESSITNPQIEAEWLKYSSYWHVDPDNPNHHG* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1155 426 SUPERFAMILY NAC domain 43 210 IPR036093 GO:0003677|GO:0006355
Lan6g1155 426 ProSiteProfiles NAC domain profile. 47 210 IPR003441 GO:0003677|GO:0006355
Lan6g1155 426 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 5 399 IPR044799 GO:0003700
Lan6g1155 426 PANTHER NAC DOMAIN-CONTAINING PROTEIN 75 5 399 - -
Lan6g1155 426 MobiDBLite consensus disorder prediction 218 244 - -
Lan6g1155 426 Pfam No apical meristem (NAM) protein 48 191 IPR003441 GO:0003677|GO:0006355
Lan6g1155 426 Gene3D NAC domain 56 214 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1155 Lan-Chr6 11639484 11646635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1155 11 423 NAC Transcription Factor Family AT5G56620 54.128 5.80e-134 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan6g1155 NAM 8.9e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1155 6 11639484 11646635 Lan6g1155 6 11639484 11646635 ECH