Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1154 ATGAAGATCGAGGAATTGGATGGTACGGAGTGTAGTGGGGTTGAAGAAGAGAAGCACGAGAAACAAATCGGTAGGGTTGATGCAAAAAGAGCGTTAGTTGGAGCAGGTGCTCGGATCCTGTTTTACCCGACCCTTTTGTATAACGTGCTTCGTAACAAAATTGAAACTGAGTTCAGGTGGTGGGATCAAGTTGATGAGTTTTTATTACTCGGCGCGGTCCCATTCCCTAAAGATGTTCCTCTGTTGAAGCAGCTTGGTGTGGGTGGTGTAATTACTCTAAATGAGCCTTATGAAACTTTGGTACCTTCATCCTTATATCATGCTCATGGGATTGATCATTTGGTCATTCCAACAAGGGATTATCTCTTTGCCCCCTCATTTGCGGATATCAGTCGGGCCGTGCAGTTCATTCACCAGAATGCATGTTGCGGTAAAACTACTTATGTCCACTGTAAAGCTGGGCGAGGGAGGAGCACGACAATTGTGCTTTGCTATCTGGTTGAATACAAGCACATGACACCTGTGGCAGCCCTGGAATATGTGCGATCTCAAAGACCTAGAGTGCTACTAGCACCATCACAATGGAAGGCTGTTCAAGGCTATCACAAAAGCAGACCTTGTTCTTTAACACGCTCTCCCTCTGGGGATGCGGTTCTTATAACCAAAGCTGATCTTGAAGGCTATCATAGCACATGTGATGCTGGTAAAGAGCTGGCCATTGTTCGCAAAGTTCCAAAGACTAAGCCCATGATAGCAAGGCTATCTTGCTTGTTTGCATCCTTAAAAGCATCGGGTAGTTTACCAATGACCAGGCGGATGCCAGTTTCTGAGTCGCGTGCTTGCTAA 846 0.4598 MKIEELDGTECSGVEEEKHEKQIGRVDAKRALVGAGARILFYPTLLYNVLRNKIETEFRWWDQVDEFLLLGAVPFPKDVPLLKQLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAPSFADISRAVQFIHQNACCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPVAALEYVRSQRPRVLLAPSQWKAVQGYHKSRPCSLTRSPSGDAVLITKADLEGYHSTCDAGKELAIVRKVPKTKPMIARLSCLFASLKASGSLPMTRRMPVSESRAC* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1154 281 CDD PTPMT1 60 204 IPR044596 GO:0004721
Lan6g1154 281 PANTHER - 1 281 - -
Lan6g1154 281 Pfam Dual specificity phosphatase, catalytic domain 82 201 IPR000340 GO:0008138|GO:0016311
Lan6g1154 281 PANTHER OS01G0739200 PROTEIN 1 281 - -
Lan6g1154 281 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 207 IPR020422 GO:0006470|GO:0008138
Lan6g1154 281 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Lan6g1154 281 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 128 196 IPR000387 GO:0016311|GO:0016791
Lan6g1154 281 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 202 IPR029021 -
Lan6g1154 281 Gene3D Protein tyrosine phosphatase superfamily 60 205 IPR029021 -
Lan6g1154 281 SMART dsp_5 63 204 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1154 Lan-Chr6 11632087 11634461 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1154 1 267 Protein tyrosine phosphatase (PTP) family AT2G35680 51.227 1.24e-99 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1154 - - gmx:100817410 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1154 6 11632087 11634461 Lan6g1154 6 11632087 11634461 ECH