Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1146 ATGGGAAGAGCCACAAGGTGGTTGAAGAACTTGTTTGGTATAAAGAGAGACAAAGAGCACAAGAAAGATTCAAATTCAAGGGGTTTGTGTCATAATCCAGCCACCATACCACCAAACATTTCTCCATCAGAAGCTGCTTGGCTTCAATCCTTATACTCAGAAACAGAGAAGGAACAGAACAAGCATGCCATTGCAGTAGCTGCAGCCACGGCAGCGGCAGCGGACGCTGCCGTGGCTGCAGCGCAGGCTGCTGTTGCAGTAGTTAGGCTAACAAGTCATGGCAGAGACACCCTTTTTGGTGGTGGACATGAAAAGTTTGCAGCTGTTAAGATTCAGACAGTGTTTCGGGGTTACTTGGCAAGGAAGGCACTAAGAGCCTTGAAAGGTTTGGTGAAGTTACAAGCACTTGTAAGAGGATATCTAGTGAGAAAAGAAGCAACAGCAACCTTGCATAGTATGCACGCTCTTGTTAGAGCTCAAGCAACAGTTCGGTCTCATAAATCTCGTGGAATCATGAACACATTGAATGAATCACATAGGTTTCAATCTGAATCAAGAAGATCCATGGAGAGGTTTGATGACATTAGGAGTGAGTACTCAGCTCCAATCTATGGCAGAAGACTATCATCTTCATTTGATGCCACAATGAATAACACCACCAACAGTGTTGAAGATAGCCCAAAAATAGTGGAAGTTGACACTGGAAATGGCAAGCCTAAGTCAAGGTCTAGAAGGACTAACACCTCAATTTCAGATTTTGGTGATGACCCTTCATTTCATGCACTTCCTTCTCCCCTCCCAATCCCATTTCACAGAAATTTCCATGACTCAGAATGGGTACTAGGTGGTGAACAATGCAAGTTTTCGACAGCACAAAGCACGCCGCGCCTTACAAACTCTTGTAGTTTTGGCTCTATTGCATCTATGACACCTAAAAGTGTTTGCACTGACAGCTTGTTCATTGGGCAACATGTCAATTTTGTACCAAATTACATGGCTAGGACTCAGTCTTTTAAGGCCAAGTTGAGGTCTCAGAGTGCTCCAAAGCAAAGGCCGGAACTGGGTCCCAAAAGGAGGCTTTCCTTGAATGAGATGATGGAATCTAGAAGTAGTTTAAGTGGTGTAAGAATGCAAAGGTCTTGCTCACAGATTCAAGAAGCTGTTAATTTTAAGAATGTTGTGATGTGTAAGCTTGAGAAGTCTACAAAATCTGGTAGGGAAACTGATAGAAACTACTTCAACCACTAG 1248 0.4351 MGRATRWLKNLFGIKRDKEHKKDSNSRGLCHNPATIPPNISPSEAAWLQSLYSETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRDTLFGGGHEKFAAVKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKEATATLHSMHALVRAQATVRSHKSRGIMNTLNESHRFQSESRRSMERFDDIRSEYSAPIYGRRLSSSFDATMNNTTNSVEDSPKIVEVDTGNGKPKSRSRRTNTSISDFGDDPSFHALPSPLPIPFHRNFHDSEWVLGGEQCKFSTAQSTPRLTNSCSFGSIASMTPKSVCTDSLFIGQHVNFVPNYMARTQSFKAKLRSQSAPKQRPELGPKRRLSLNEMMESRSSLSGVRMQRSCSQIQEAVNFKNVVMCKLEKSTKSGRETDRNYFNH* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1146 415 Pfam Protein of unknown function (DUF4005) 294 374 IPR025064 -
Lan6g1146 415 SMART iq_5 103 125 IPR000048 GO:0005515
Lan6g1146 415 SMART iq_5 126 147 IPR000048 GO:0005515
Lan6g1146 415 ProSiteProfiles IQ motif profile. 104 132 IPR000048 GO:0005515
Lan6g1146 415 PANTHER IQ-DOMAIN 5-RELATED 1 402 - -
Lan6g1146 415 Pfam IQ calmodulin-binding motif 107 125 IPR000048 GO:0005515
Lan6g1146 415 Pfam IQ calmodulin-binding motif 131 145 IPR000048 GO:0005515
Lan6g1146 415 Gene3D - 103 153 - -
Lan6g1146 415 ProSiteProfiles IQ motif profile. 128 155 IPR000048 GO:0005515
Lan6g1146 415 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 402 - -
Lan6g1146 415 MobiDBLite consensus disorder prediction 218 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1146 Lan-Chr6 11555357 11558931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1146 1 377 IQD Protein Family AT3G16490 52.604 1.39e-95 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1146 - - var:108346918 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1146 6 11555357 11558931 Lan6g1146 6 11555357 11558931 ECH