Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1142 ATGTTACCCTTTTGTGTATGTTCTGTTTGGTTCCCAATAAAATTTCTCATGGATGATGATGTTCTGAACATGTCCAATTGGGGTTATTATGAACCCTTCAAAGGTGGGCATCTTGGTCTGCAGCTCATGCCTGGCATGACAGATCGGGGAACGAAACCATTTTTGCCTGGCCGTGATCCATCTATGCTTGTTGGTGGAAATGATCATGACTCAAAACCATATTTATCTGGCCGTGATCCATCTTTTTTTATTGGTGTGAATGATCGTGACTCAAAACCATTTTTGTCTGGTCGTGATCCATCTATGTTTGTTGGTGCGAATGATCGTGACATGAAACCATTTTTGCCTGGTCGTGAGCCATCTATGTTTATTGGTGCGAATGGAATCATGCATCAAAGAGATTGCATTGTTTCAGAGGCACCAATGCTGATGAACTATGCCAGGGATGGTTGGATAAGCCAGAGGGATATGTTTTTTAATATGCCCTCTGTCGCTCCTAATTATGCTATTCTTCCAGAAACATCAGCACCTACTTCCTTGCGAACTGTACAGCTACCTGATACTTCAAGAGATGAGAAGGTGGATAGCATTGAAGACTCAGTTGTTAAAAAAGGTGGCCAATCAAAGAAAAGGCAAAGTAGGGGTGATTTAACGACTCCAAAGACCAAGAAACCTAGGAAGCCAAAGGATAACAGCAATGCTTCAGTGCAACGTGCGAATCCAGTTAAGAAGACTATGGAGCTTGTCATAAATGGAATTGACATGGATATTTCTGGCCTTCCCATTCCTGTTTGTTCATGCACTGGTACTCCTCAGCAATGTTATCGCTGGGGCTGTGGAGGTTGGCAATCAGCTTGTTGTACCACAAATGTGTCAATATATCCTTTGCCAATGAGCGTAAAAAGGCGTGGTGCAAGGATAGCTGGGCGGAAGATGAGCCAAGGCGCTTTTAAAAAGGTTTTAGAGAAACTGGCAGCTGAAGGTTATAATTTTGCAAACCCAATTAATCTGAGGACTCATTGGGCTAGACATGGAACCAACAAGTTTGTCACTATCAGGTAG 1062 0.4284 MLPFCVCSVWFPIKFLMDDDVLNMSNWGYYEPFKGGHLGLQLMPGMTDRGTKPFLPGRDPSMLVGGNDHDSKPYLSGRDPSFFIGVNDRDSKPFLSGRDPSMFVGANDRDMKPFLPGREPSMFIGANGIMHQRDCIVSEAPMLMNYARDGWISQRDMFFNMPSVAPNYAILPETSAPTSLRTVQLPDTSRDEKVDSIEDSVVKKGGQSKKRQSRGDLTTPKTKKPRKPKDNSNASVQRANPVKKTMELVINGIDMDISGLPIPVCSCTGTPQQCYRWGCGGWQSACCTTNVSIYPLPMSVKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPINLRTHWARHGTNKFVTIR* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1142 353 SMART GAGA_bind_2 17 353 IPR010409 -
Lan6g1142 353 PANTHER - 108 353 IPR010409 -
Lan6g1142 353 PANTHER - 11 67 IPR010409 -
Lan6g1142 353 MobiDBLite consensus disorder prediction 179 241 - -
Lan6g1142 353 MobiDBLite consensus disorder prediction 186 231 - -
Lan6g1142 353 PANTHER BNAA06G09500D PROTEIN 11 67 - -
Lan6g1142 353 PANTHER BNAA06G09500D PROTEIN 108 353 - -
Lan6g1142 353 Pfam GAGA binding protein-like family 107 353 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1142 Lan-Chr6 11357752 11366523 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1142 17 67 BBR or BPC Transcription factor family AT2G01930 57.143 5.29e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lan6g1142 GAGA_bind 1.3e-92 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1142 - - lang:109349833 738.028