Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1135 ATGGAACCCTCACAGGACGACCAACACGAACGAGTCGACTCAGAGTTTACCTCAACGAGTTCCGGTTCAGGCATTTCCTCCATACTCAGCATCGACGACCTCCGCAACATGACCATCACCAGCAGCGAAGTTTCCTCCATCAGCAGCGGTGGCTCCGGCGAGATTCCGCCGATGACGAGGGAGAAGTGTGTGGGGAGAAAGAACAAGGGAGTGAGCTGGGGACAGAGTTCAGTGATCGGAAGAAGGAAAGAGATGGAAGATGCTGTTGCGGTTATTCCAGGATTCATGTCTCGTATGTGTGATCATGTTGGAGGTTGTACGGCTCCTGGTTCTAGATCCTCCGATGAGATCTCACCGGTTCATTTCTTCGGCGTTTACGACGGCCACGGTGGATCTCAGGTGGCTAAATTTTGTGCCAAGCGGATGCACCTTGTTATAGCAGAAGAGTGTGATAAAGAAAATGCTGGTGGCACTGAATGGCAGAGAAGGTGGGAGGCTGTATTTGCCAAAGGCTTTGAGAGAACTGACACTGAAGTCCTATTAGATGCAGTTGCACCAGAAATGGTAGGATCTACTGCTTCTGTGGTGGTTCTATCTGGTTGCCAAATTATTACATCTAATTGTGGTGACTCAAGGGTAGTTCTTTGCCGTAGGACCCAAACAATCCCCTTGACCGTGGATCAGAAGCCTGATAGACAAGATGAACTCCTGAGAATTGAAGGAACAGGAGGAAAAGTGATAAACTGGAATGGAGCTAGGGTGTTTGGTGTCCTTGCCATGTCCAGGGCCATAGGAGACAGGTACTTGAGGCCATGGATTATTCCAGTGCCCGAGATAACTTTTACAGCAAGAACTGAGGAGGATGAATGCTTAGTTTTGGCAAGTGATGGACTCTGGGATGTAATGACCAATGACGAGGTTGGGGAAGTTGCACGACATATTCTAAGGCGGCGGCGCAGGTTGTCCTTATCAACAGAAGAAATATCTCCAGCACAAGTTGTTGCAGATAGCCTGACTGAGATTGCATATGGTAGAAATAGTGAAGATAACATTTCAATCATAGTTGTTGATCTGAAATCAAAGAGAAGACGCCAGCTAAGGCCTCCTTTAGTTTCCTAA 1119 0.479 MEPSQDDQHERVDSEFTSTSSGSGISSILSIDDLRNMTITSSEVSSISSGGSGEIPPMTREKCVGRKNKGVSWGQSSVIGRRKEMEDAVAVIPGFMSRMCDHVGGCTAPGSRSSDEISPVHFFGVYDGHGGSQVAKFCAKRMHLVIAEECDKENAGGTEWQRRWEAVFAKGFERTDTEVLLDAVAPEMVGSTASVVVLSGCQIITSNCGDSRVVLCRRTQTIPLTVDQKPDRQDELLRIEGTGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTARTEEDECLVLASDGLWDVMTNDEVGEVARHILRRRRRLSLSTEEISPAQVVADSLTEIAYGRNSEDNISIIVVDLKSKRRRQLRPPLVS* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1135 372 MobiDBLite consensus disorder prediction 42 68 - -
Lan6g1135 372 MobiDBLite consensus disorder prediction 1 25 - -
Lan6g1135 372 Gene3D - 59 367 IPR036457 -
Lan6g1135 372 PANTHER ALPHABET, ISOFORM E-RELATED 54 367 - -
Lan6g1135 372 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 54 367 - -
Lan6g1135 372 SUPERFAMILY PP2C-like 58 359 IPR036457 -
Lan6g1135 372 ProSitePatterns PPM-type phosphatase domain signature. 122 130 IPR000222 GO:0043169
Lan6g1135 372 ProSiteProfiles PPM-type phosphatase domain profile. 72 358 IPR001932 -
Lan6g1135 372 SMART PP2C_4 62 356 IPR001932 -
Lan6g1135 372 CDD PP2Cc 74 358 IPR001932 -
Lan6g1135 372 Pfam Protein phosphatase 2C 80 351 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1135 Lan-Chr6 11197390 11204777 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1135 73 368 PP2C-type Phosphatase Gene Family AT4G26080 49.206 2.49e-97 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1135 K14497 - gmx:100793293 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1135 6 11197390 11204777 Lan6g1135 6 11197390 11204777 ECH