Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1132 ATGCAACTTTATGATCAATTCGTTAGCCAAACTTGTGAGACCAACAACAATACCGTGGTCATGTCACTGCCATCTTCCAACCATTCCATAGACTTGGGAAGTTTTGATCTGGACGAGGCTCTTGCGGTGGCGGGAGAATCATGCCGCCAATTGGCGGTGTCGAAGACCATTGTGTTAAACTTACCGGCGGCTGAGGAGGTGATGACGGAGGAGGATGTTTGCTCCATTTGCATGGAAGGATTTAGAAGTAACAATACAAATGAGGGAAACAAAAAAGTCCCATGTGGCCACGTGTACCACTCAAATTGCATCACGCTCTGGCTCTGTTACTCCAACTCTTGCCCTATTTGCCGCAGCCATATCTACCCCTCTCCCTCTAGTTCCATTCCAGTTTAA 396 0.4747 MQLYDQFVSQTCETNNNTVVMSLPSSNHSIDLGSFDLDEALAVAGESCRQLAVSKTIVLNLPAAEEVMTEEDVCSICMEGFRSNNTNEGNKKVPCGHVYHSNCITLWLCYSNSCPICRSHIYPSPSSSIPV* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1132 131 SMART ring_2 74 117 IPR001841 -
Lan6g1132 131 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 30 121 - -
Lan6g1132 131 Pfam Ring finger domain 73 118 IPR001841 -
Lan6g1132 131 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE 30 121 - -
Lan6g1132 131 ProSiteProfiles Zinc finger RING-type profile. 74 118 IPR001841 -
Lan6g1132 131 SUPERFAMILY RING/U-box 65 124 - -
Lan6g1132 131 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 49 125 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1132 Lan-Chr6 11149154 11149743 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1132 72 122 C3H Transcription Factor Family AT4G30370 44.231 3.91e-11 55.8