Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1113 ATGGGTGAAGGTGAGGGTGTTGATTATCCTCCAAAGAATGTATCATCATCTGATGATGCAGATGCTGCACCTGCACTCGATGTTCCGGCCAAGAAGCTCGCGAGGCAGCTCGATTTCACAGGCTCCAGTGGGGCTGTGCCATTGCCTGAACAGCTACAGCCACAATCACAGCCGCAATCGCAGCTGCAACAGCTTCAGCTTGTTGTGGCACATAGTCAGTTACCTCTGCAGCCACGGCCGCCATTGCCTCAGACTCTGGCGCAATCAGTGATTTCTACGCAGTTGCTTCTGCCGCAGGCGCCTCATCCTTCAGTGAGGGTTGGGAAACCAGATTCTCCAAAAGCAAAATCAAGACCCAATTTTGAAATTAAGGACTGTACTCCAAAGAAGCAAAAGCAGTGCAATTGCAAACACTCAAAATGTTTAAAGCTATACTGTGAATGTTTTGCATCGGGAATATATTGTGATGGTTGCAACTGTGTAAATTGTTATAACAATGTTGAAAATGAAGCTGCTAGACGAGAAGCTGTTGAAGCTACTCTGGAACGCAATCCAAATGCATTTAGGCCAAAAATTGCGAGCAGCCCTCATGGAGCACGTGGTAGAAGGGAGGAGGCTGGGGAAGTTTTAATATTGGGGAAGCATAACAAGGGGTGTCATTGTAAAAAATCTGGGTGCCTCAAGAAGTACTGTGAGTGCTTCCAGGCCAACATTCTTTGTTCTGAAAATTGTAAATGCATGGACTGCAAGAACTTTGAGGGAAGTGAAGAAAGACAAGCTTTGTTCCATGGAGATCAAAACAACAACATTGTGTATATTCAGCAGGCTGCAAATGCTGCCATAACTGGAGCTATTGGTTCCTCGGGTTTTTCATCACCACCTCTTTCAAAGAAAAGAAAAGGTCAGGAACTATACTTTGGGCCAACAATGAAGGATCCATCTGTTGGCAGGCTGGGACAACAGGCAAACCACATTAGGAGTCCTGCACCCTCCTCATCCTTATCTCCTATCCCAGGTGCTCGTGTTGGAACTTCAACAGTAGGTCCTTCAAAAGTTATGTACAGGTCTCTTTTAGCAGACATCATACAACCACAGCACCTTAAGGAGCTTTGCTCAGTTCTGGTGCTAGTATCTGGACAAGCTGCAAAGACACTGACAGACCAGAAAAACTTAAAGGATAAGCATACAGAAGATCTGCCGGAAACTTCTCATGCTTCTTCAACTCAAGAGCAACTACCAAGCCAAAAGGAAGCCGATGATTGTTCGAGTGCAAACCAAATAGATAAAATCAGCCCAGATAATTCCAGTTCAGATGGTGCTGATGCCCCGAAAGGGAGGCCAATGTCTCCTGGAACTTTAGCATTAATGTGCGATGAGCAAGATCCAATGTTCATGGCTACTGCCTCCCCCATTGGGTCAATTGCGCATGCTTGCAACACTTCTTCACAATTGCCTTATGGACAGGGAATGACAGATGTCTATGCAGAGCAAGAAAGGATTGTGTTGACAAAGTTTAGAGATTTTCTTAACAGGGTTATCACTATGGGAGAAATAAATGAAACAAAGTGTTCTTCAATAGCCCGAAGTGAATTAGAGAGTCAAAATGAACTAATCATCAATGGCGCCGGAAATGCCAGTTCCGAGACAACACAGCAGCAGGGAGACACTAGTGTTGTTCCACCCATGACAACAAGTATGAGTACATCTTCAACATCTTTAGTTCCTAATAATGTTGTTCCTGAAAATGGGGAAGCTAAGCTGGAGGTTGAAAAAGATATTTGA 1782 0.4467 MGEGEGVDYPPKNVSSSDDADAAPALDVPAKKLARQLDFTGSSGAVPLPEQLQPQSQPQSQLQQLQLVVAHSQLPLQPRPPLPQTLAQSVISTQLLLPQAPHPSVRVGKPDSPKAKSRPNFEIKDCTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGARGRREEAGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNIVYIQQAANAAITGAIGSSGFSSPPLSKKRKGQELYFGPTMKDPSVGRLGQQANHIRSPAPSSSLSPIPGARVGTSTVGPSKVMYRSLLADIIQPQHLKELCSVLVLVSGQAAKTLTDQKNLKDKHTEDLPETSHASSTQEQLPSQKEADDCSSANQIDKISPDNSSSDGADAPKGRPMSPGTLALMCDEQDPMFMATASPIGSIAHACNTSSQLPYGQGMTDVYAEQERIVLTKFRDFLNRVITMGEINETKCSSIARSELESQNELIINGAGNASSETTQQQGDTSVVPPMTTSMSTSSTSLVPNNVVPENGEAKLEVEKDI* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1113 593 MobiDBLite consensus disorder prediction 101 120 - -
Lan6g1113 593 MobiDBLite consensus disorder prediction 320 340 - -
Lan6g1113 593 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 27 553 - -
Lan6g1113 593 MobiDBLite consensus disorder prediction 402 438 - -
Lan6g1113 593 MobiDBLite consensus disorder prediction 317 344 - -
Lan6g1113 593 MobiDBLite consensus disorder prediction 543 578 - -
Lan6g1113 593 Coils Coil 164 184 - -
Lan6g1113 593 ProSiteProfiles CRC domain profile. 130 254 IPR005172 -
Lan6g1113 593 MobiDBLite consensus disorder prediction 543 593 - -
Lan6g1113 593 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 131 166 IPR005172 -
Lan6g1113 593 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 217 251 IPR005172 -
Lan6g1113 593 MobiDBLite consensus disorder prediction 388 454 - -
Lan6g1113 593 MobiDBLite consensus disorder prediction 1 59 - -
Lan6g1113 593 SMART CXC_2 214 255 IPR033467 -
Lan6g1113 593 SMART CXC_2 129 169 IPR033467 -
Lan6g1113 593 PANTHER TESMIN/TSO1-RELATED 27 553 IPR028307 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1113 Lan-Chr6 10868687 10875423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1113 1 532 CPP Transcription Factor Family AT4G29000 55.738 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lan6g1113 TCR 3.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1113 - - gmx:100777698 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1113 6 10868687 10875423 Lan6g1113 6 10868687 10875423 ECH