Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1106 ATGTCAACCACCGCTTCTCCCGGCGTATCGCCGGTACCAAATTCAACTCCGGCGACCAACGCCACTTCTCCTCCTCCACCATCACCTCCCACCCCTTCCTCACCGCCACCATCTAACCATTCTTCTCCCCCACCAACTACCCCTTCCCCCTCCCCTCCCTCTCCAGAGAAGCCACCACCTTCTCCCGCGCCGGAATCTCCCCCGGATTCTCCGCCGCCGCCGACCACCCCTTCAAATCCGCCGCCGCCGACCAGTCCTTCAAATCCTCCACCGAATCCGGCCACCCCTTCAGCTTCTCCGCCGCTTCCGGCTTCCGGCAAAAACCCACCTGCTCCAGTCACTCGGCTCTCTCCTCCTCCATCTTCCCCAGTCCCGCGGGACACTCCGTCGGCGTCGTCAAGTATTTCGACAGGAGTTATTGCCGGAATCGCGGCGGGGGTGGTGGGGGTTATTCTGTTATGTGTTTTGGGCATTTGTATTATGAAGAGGAAGAAAAGACGTAAAAGTCAATACTATCCTCCACCACCACCACAAGGACCTAAAGTTGATCCATATGGTAGATCCCCAGCAAATTGGCAAAACAATGCTCCGCCTCCTTCCGATCACATAATATCTGCAGTGCCACCAACACCACCACATCCACCTAAAACTCCACCTTATATAAATAACAGTGGTGGGTCTAGCTCAAACTTTTCAGGTGGTGCGTATCCACTTCCGCCTTTTTCTCCAGGCATGGGATTGAGCTTTTCAAAGAGCACATTTACATATGAGGAGTTGGCTCGAGCTACAGATGGCTTCTCTGATGCCAACCTCCTTGGACAAGGTGGATTTGGATACGTGCATAAAGGTGTTCTGCCAAATGGCAAGGAGGTTGCAATCAAGCAGCTTAAGGCCGGAAGTGGGCAAGGGGAGCGTGAGTTTCATGCTGAAATAGAGATAATTAGCAGGGTTCATCACAAACATCTTGTTTCTTTGGTTGGATACTGCACCACTGGGGTACAAAGGCTGCTTGTTTATGAATTTGTTCCAAATGATACATTGGAGTTCCATTTGCATGGTAAAGGGCAACCTACTATGGATTGGTCCACAAGACATAGAATTGCTTTAGGAGCTGCAAAAGGACTAGCGTATCTTCATGAGGATTGTCATCCTAAGATCATTCATCGTGATATCAAAGCTGCTAACATACTTCTGGACTTCAAGTTTGAAGCAATGGTTGCAGATTTTGGCTTAGCAAAGTTTACTTCTGATGTCAACACTCATGTTTCTACTAGAGTGATGGGGACTTTTGGGTATCTAGCTCCAGAATATGCTGCAAGTGGAAAGCTTACAGACAAATCAGATGTTTACTCCTTTGGAGTTATGCTCTTGGAATTAATTACAGGTCGCCGACCAGTTGATTCAAGCCATACTTTCCAGGAGGATAGTTTGGTAGACTGGGCAAGGCCTGTGCTCACACAAACTTTAGAAGATGAAAATTTTGATTCTCTGGTTGATCCAAGGCTCCAGAATGAGTATGACCGGAATGAGATGGCTTGCATGGTGGCATGCGCTGCAGCAGCCATAAGATATTCAGCGAAGCGTCGACCAAAGATGAGCCAGATTGTTCGTGCCCTGGAAGGAGATGCAACTTTAGAAGATCTTAATGACGGTGCTAAACCTGGAAACAGCAGTGCCTACGGTTCTCGTGGAAACTCAGATTATGACTCTGCACAATACAAAAAGGACATGAGTAAGTTCAGAAAATTAGCATTGGAAACCCAAGAGCATGGTGACGCCAGCAGCGAGTACAATGGAGTTACGAGTGAGTATGGTTTAAACACATCTGAATCGAGCGGTGAAATCCATAACCGCCAGACAACAAGGGAAATGGAAATGAGAAAGATGAAGAACAATCAAGGTTTCAAGGGAAGCTCTTGA 1920 0.4833 MSTTASPGVSPVPNSTPATNATSPPPPSPPTPSSPPPSNHSSPPPTTPSPSPPSPEKPPPSPAPESPPDSPPPPTTPSNPPPPTSPSNPPPNPATPSASPPLPASGKNPPAPVTRLSPPPSSPVPRDTPSASSSISTGVIAGIAAGVVGVILLCVLGICIMKRKKRRKSQYYPPPPPQGPKVDPYGRSPANWQNNAPPPSDHIISAVPPTPPHPPKTPPYINNSGGSSSNFSGGAYPLPPFSPGMGLSFSKSTFTYEELARATDGFSDANLLGQGGFGYVHKGVLPNGKEVAIKQLKAGSGQGEREFHAEIEIISRVHHKHLVSLVGYCTTGVQRLLVYEFVPNDTLEFHLHGKGQPTMDWSTRHRIALGAAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAMVADFGLAKFTSDVNTHVSTRVMGTFGYLAPEYAASGKLTDKSDVYSFGVMLLELITGRRPVDSSHTFQEDSLVDWARPVLTQTLEDENFDSLVDPRLQNEYDRNEMACMVACAAAAIRYSAKRRPKMSQIVRALEGDATLEDLNDGAKPGNSSAYGSRGNSDYDSAQYKKDMSKFRKLALETQEHGDASSEYNGVTSEYGLNTSESSGEIHNRQTTREMEMRKMKNNQGFKGSS* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1106 639 Gene3D Phosphorylase Kinase; domain 1 248 341 - -
Lan6g1106 639 MobiDBLite consensus disorder prediction 18 126 - -
Lan6g1106 639 MobiDBLite consensus disorder prediction 1 17 - -
Lan6g1106 639 MobiDBLite consensus disorder prediction 165 226 - -
Lan6g1106 639 Gene3D Transferase(Phosphotransferase) domain 1 342 552 - -
Lan6g1106 639 ProSiteProfiles Protein kinase domain profile. 266 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1106 639 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 24 620 - -
Lan6g1106 639 PRINTS Proline rich extensin signature 6 27 - -
Lan6g1106 639 PRINTS Proline rich extensin signature 30 46 - -
Lan6g1106 639 PRINTS Proline rich extensin signature 47 64 - -
Lan6g1106 639 PRINTS Proline rich extensin signature 65 90 - -
Lan6g1106 639 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 24 620 - -
Lan6g1106 639 MobiDBLite consensus disorder prediction 202 219 - -
Lan6g1106 639 Pfam Protein tyrosine and serine/threonine kinase 271 539 IPR001245 GO:0004672|GO:0006468
Lan6g1106 639 MobiDBLite consensus disorder prediction 546 570 - -
Lan6g1106 639 SUPERFAMILY Protein kinase-like (PK-like) 242 539 IPR011009 -
Lan6g1106 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 386 398 IPR008271 GO:0004672|GO:0006468
Lan6g1106 639 MobiDBLite consensus disorder prediction 616 630 - -
Lan6g1106 639 MobiDBLite consensus disorder prediction 1 134 - -
Lan6g1106 639 MobiDBLite consensus disorder prediction 587 639 - -
Lan6g1106 639 ProSitePatterns Protein kinases ATP-binding region signature. 272 294 IPR017441 GO:0005524
Lan6g1106 639 SMART serkin_6 266 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1106 639 MobiDBLite consensus disorder prediction 591 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1106 Lan-Chr6 10800220 10805334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1106 140 610 Trihelix Transcription Factor Family AT1G70460 51.012 6.78e-160 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lan6g1106 PK_Tyr_Ser-Thr 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1106 - - gmx:732569 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1106 6 10800220 10805334 Lan6g1106 6 10800220 10805334 ECH