Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1105 ATGGAAAACCAAAACCGTCTCAAACTCCGAATCTCCCGCATGTTCCGATCTTCGTTCGGATCCTGCAGTACCCGAAACTTCAATGATGTTATGGAAAAAGCAGTGTTCTCTCCACCTCAAAACCGCAGTGTCACCTTCCACCAACTTCTAATGGACCCACCCTCCCCAAAACCACGACCCTTTCCTTCCATTTGCAAACCCAAAGTGTCTCAAACATCCCAAACCACAAACGACCAATGCATCATGTCGTTTAAGGATTCACTCCCAAGACCCAAAATCTCAGAAAAAAGCTTACCACCCTTTGCCAACAACAGCAGATCATACCCCCTTGTTTCTCCAAATACCCCCTTCGATGACACCGTTTTTGGGTTTGAAGAAACAACGAAAGACTCAAAGAGAAACATAAGGAACAATAAAAAGAAGAAGAAGAAGAACAATAACCAGAAGAGAAGAGAGATTTTCCCATTTAACTCTTGCGCTAAAGACAAAAACTTTGGTGACTATTATTGCTTCGGTAGCGATGAAGATGATGAAACAGATACGCTTTTCTCCTCAAAGAGCATATCTTCTGATTCTTCAAGGTCTCGCCGCCGCCGCCGGAAAAACAACTCCGGTGAACGGAAGAAGGGTCAAGGATCTGAAATGGGTGTTCTTCCGTTGCATGGGAATGGGAAGGTGAAGGATACGTTCGCGGTGGTTAAGCGTTCGAGTGACCCGTACAATGATTTCAGGACTTCAATGGTGGAGATGATAGTGGAGAAGCAGATATTTTCGCCACGAGATTTGGAGAATCTGTTGCAGTGTTTTCTGTCGCTAAATTTGTATCATCATCATAAGATCATTGTTGAAGTTTTCACAGAGATTTGGGAAACTTTATTCTCCGACTGGCTTTGA 894 0.4374 MENQNRLKLRISRMFRSSFGSCSTRNFNDVMEKAVFSPPQNRSVTFHQLLMDPPSPKPRPFPSICKPKVSQTSQTTNDQCIMSFKDSLPRPKISEKSLPPFANNSRSYPLVSPNTPFDDTVFGFEETTKDSKRNIRNNKKKKKKNNNQKRREIFPFNSCAKDKNFGDYYCFGSDEDDETDTLFSSKSISSDSSRSRRRRRKNNSGERKKGQGSEMGVLPLHGNGKVKDTFAVVKRSSDPYNDFRTSMVEMIVEKQIFSPRDLENLLQCFLSLNLYHHHKIIVEVFTEIWETLFSDWL* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1105 297 MobiDBLite consensus disorder prediction 128 155 - -
Lan6g1105 297 ProSiteProfiles OVATE domain profile. 232 291 IPR006458 -
Lan6g1105 297 Coils Coil 132 152 - -
Lan6g1105 297 MobiDBLite consensus disorder prediction 134 148 - -
Lan6g1105 297 MobiDBLite consensus disorder prediction 179 222 - -
Lan6g1105 297 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 7 297 IPR038933 GO:0045892
Lan6g1105 297 PANTHER OVATE PROTEIN FAMILY-RELATED 7 297 - -
Lan6g1105 297 Pfam Transcriptional repressor, ovate 236 293 IPR006458 -
Lan6g1105 297 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 230 293 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1105 Lan-Chr6 10766543 10767562 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lan6g1105 Ovate 9.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1105 - - adu:107478678 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1105 6 10766543 10767562 Lan6g1105 6 10766543 10767562 ECH