Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1098 ATGACAGGTCTCGAACATGATCAAGCCAGCTCTTTCCACAAGGTCCCCAACATCAAGTTCACCAAGCTCTTCATTAATGGAAGTTTTGTTGATTCTGTTTCAGGAAAGACTTTCGAGACAATAGATCCAAGAACAGGAGATGTTATAACGAGGATCAGTGAGGGAACACAAGAAGACATAAATGTTGCTGTAAAGGCAGCACGTTGTGCATTTGATTCAGGTCCATGGCCTCGCATGCCCGGTGCGGAAAGAGCAAAAATTATGATGAAATGGGCAGAGTTAATTGACCAAAACGTTGAAGAACTAGCAACACTGGATGCCATTGATGCAGGAAAATTGTACCATATGTGTAAAGCCGTGGATATTCCTGGAGCAACAAAAACTCTACGTTACTATGCTGGTGCTGCTGATAAAATTCACGGTGAAGTATTAAAAATGTCTCGAGAGTTTCATGCATATACATTAAAGGAACCAATTGGTGTTGTGGGACACATAATTCCTTGGAATTTTCCCACTACAATGTTCTTCATCAAAGTTAGTCCTTCCTTAGCTGCTGGTTGCACCATGGTTCTTAAGCCTGCTGAACAAACACCACTCTCTAGTTTGTTTTATGCTCATCTAGCTAAACTGGCTGGAATTCCAGATGGGGTGTTGAATGTGGTACCTGGATTTGGCCATATAGCTGGTGCTGCAATAACGTCACACATGGACATTGATGCGGTTAGCTTTACTGGTTCAACACAAGTAGGCCGTGAAGTAATGCAATCTGCTGCAAGGAGTAACTTGAAACAGGTTTCACTTGAATTAGGAGGCAAGTCACCCCTCATAATTTTTAATGATGCTGATATAGATAAAGCTGCTGAGCTTGCTCTCTTGGGCATCCTATATAACAAGGGAGAAGTTTGTGTTGCAAGTTCCCGTGTGTTCGTTCAAGAAGGGATTTATGACGAATTTGAGAAGAAGTTGGTAGAAAAGGCAAAAGCTTGGGTTGTTGGAGATCCTTTTGATCCTAAAGTTAACCAAGGGCCTCAAGTTGATAAAGAACAATTTGAGAAAATCCTTTCCTATATAGAGCATGGAAAGAGAGAAGGAGCTACCCTTTTGACCGGGGGTAAAAGAATAGGTAACAAGGGCTACTTTATTGAGCCAACAATTTTCTCCAATATAAAGGAGGATATGCTTATAGCTCAAGATGAAATTTTTGGCCCTGTGATGGCACTGAAAAAGTTCAAGACAATTGATGAAGCAATAAAGAGTGGCAACAATAGTAGATATGGGCTAGCAGCAGGGATTGTGACAAAGAACTTGGATATAGCAAATACTGTATCAAGGTCCATTCGTGCAGGCACTATTTGGATTAACTGCTATTTTGCATTCGGGGATGATGTTCCTTTTGGAGGGTATAAAATGAGTGGTTTTGGTAAAGATCATGGATTGGATGCCCTTCACAAGTACCTACAAGTTAAATCTGTTGTAACTCCCATTTACAATTCTCCTTGGCTTTGA 1506 0.4097 MTGLEHDQASSFHKVPNIKFTKLFINGSFVDSVSGKTFETIDPRTGDVITRISEGTQEDINVAVKAARCAFDSGPWPRMPGAERAKIMMKWAELIDQNVEELATLDAIDAGKLYHMCKAVDIPGATKTLRYYAGAADKIHGEVLKMSREFHAYTLKEPIGVVGHIIPWNFPTTMFFIKVSPSLAAGCTMVLKPAEQTPLSSLFYAHLAKLAGIPDGVLNVVPGFGHIAGAAITSHMDIDAVSFTGSTQVGREVMQSAARSNLKQVSLELGGKSPLIIFNDADIDKAAELALLGILYNKGEVCVASSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVNQGPQVDKEQFEKILSYIEHGKREGATLLTGGKRIGNKGYFIEPTIFSNIKEDMLIAQDEIFGPVMALKKFKTIDEAIKSGNNSRYGLAAGIVTKNLDIANTVSRSIRAGTIWINCYFAFGDDVPFGGYKMSGFGKDHGLDALHKYLQVKSVVTPIYNSPWL* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1098 501 SUPERFAMILY ALDH-like 15 497 IPR016161 GO:0016491
Lan6g1098 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Lan6g1098 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
Lan6g1098 501 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 4 501 - -
Lan6g1098 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 4 501 - -
Lan6g1098 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Lan6g1098 501 Pfam Aldehyde dehydrogenase family 29 491 IPR015590 GO:0016491
Lan6g1098 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1098 Lan-Chr6 10652797 10657466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1098 14 501 Aldehyde Dehydrogenase Gene Family AT3G24503 71.166 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1098 K12355 - gmx:100811540 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0911 17 11980939 11990611 Lan6g1098 6 10652797 10657466 LSH
Lan6g1098 6 10652797 10657466 Lan3g0315 3 2185523 2190101 PCT
Lan3g0315 3 2185523 2190101 Lan6g1098 6 10652797 10657466 PCT