Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1097 ATGAGAGTTATGGATTCCACTAGCAACCATGAGAATCACAATAATGCAGTGAACTTAAAAACCACACCAAGAGGGTTTGTTACCAAACTCAAATCAGGAGTGAAAGAAATGTTCTTCCCTAATGACCTATTTAGGCATTTGAAGAATGAAGAGAAGCCATTGCGTAGGGTCCTTAAAGGGGTTCAATATTTCATCCCAATCTTGGAGTGGCTCCCCAATTACACTTGGAGTTTGTTTTGCTCAGATTTCATAGCTGGTCTCACCATCACTAGCCTTACTATCCCTCAAGGCATTAACTATGCCAAACTCGCTTACCTTCCTCCCATTATTGGCTTATATAGCAGCTTCGTGCCAGCAATATTATATGCTATTTTTGGTACATCAAGGCACATGGCAGTGGGGACCGTGGCATCATCATCAATTCTTATATATCAAACTATCTCAAAAGTGGCAAAACCAGAAGATGACCCAAAGTTGTACCTTCATTTGGTTTTCACAACTACCCTTGTTGCTGGTGCCTTTCAGGCTTGTTTGGGTATTCTCAGGTTGGGGACAATTGTGAATTTCTTGTCCCGTTCAGCTATAACTGGATTCATTGGAGGGTCAGCAATAATGCTCTCCCTTCATCAACTACAGAGCATTTTTGGGATGAAACACGTTGTGAGTAGTAAAACGGACCTCATAACAGTACTGAACAACATATGGACCTATAGACACGAGATAAGATTGGAGACCACAGTTCTGGGCTTGATCATCATTATTTTCTTGCAGTTTACTAGATACGTGGAAGGAATAACAGTAGGAAGAAACTTTGCCGAGGTTGATAATTCATCTTATGTTGAAAACAAAGAGATGATAGCTTTTGGTCTTATGAACTTATGTGGTTCATTTACTTCATGTTACTTGACTACTGGTCCATTTTCCAAAACGGCTATGAACTACAATGCAGGGTGTAAAACAGCTATGTCAAACATAGTTCAAGCATTCTTGATGGCATTCACACTACAATTTTTGGCCCCATTATTTTATTACACCCCTCTTTTTGCTTTATCAGCTATTACAGTTTCTACCATGCTGGGGTTAATTAATTATACCGAAGCTATTAATCTTTATAAAGTTGATAAGTTTGATTTTATTATTTGCATCGCGGCCTTTCTTGGAGTAATCTTTGGAGCTTTAGATGTTGGTCTCATGCTATCAGTTGGTCTTGGTGTGCTTAGAGCACTCTTATATGTGGCTAGGCCTACTATATGTACGCTTGGTATGTTACCTGACTTGGGTATATATAGAGATGTTAAACAGTACATTGCTTCAACATTCCCTGGAGTTATGATTGTACAACTTGGTTCTCCGATTTTCTTTGCAAATTATACCTATATCAGAGAAAGAATTATGAGCTATGTCCGAAGTGAACAAGACTCCAATGGAGGTATTATTGAGCATATCATACTCGATATGTCAGGAGTAACATCCATTGACACCACAGCTATTCAAGGATTGTTGGAGACAAATAAAATCTTTGAGATGAATGGAATGAAGATGTCAATAGTAAACCCAAGAATGGATGTTTTGGAGAAGCTTATAGTATCAAGGTTTGTTGACAAAATTGGGAAGAAATCGTTTTTTCTAACATTAGACGATGCAGTAAAGGCGAGTAACCTACTCACGTTGTGA 1674 0.3859 MRVMDSTSNHENHNNAVNLKTTPRGFVTKLKSGVKEMFFPNDLFRHLKNEEKPLRRVLKGVQYFIPILEWLPNYTWSLFCSDFIAGLTITSLTIPQGINYAKLAYLPPIIGLYSSFVPAILYAIFGTSRHMAVGTVASSSILIYQTISKVAKPEDDPKLYLHLVFTTTLVAGAFQACLGILRLGTIVNFLSRSAITGFIGGSAIMLSLHQLQSIFGMKHVVSSKTDLITVLNNIWTYRHEIRLETTVLGLIIIIFLQFTRYVEGITVGRNFAEVDNSSYVENKEMIAFGLMNLCGSFTSCYLTTGPFSKTAMNYNAGCKTAMSNIVQAFLMAFTLQFLAPLFYYTPLFALSAITVSTMLGLINYTEAINLYKVDKFDFIICIAAFLGVIFGALDVGLMLSVGLGVLRALLYVARPTICTLGMLPDLGIYRDVKQYIASTFPGVMIVQLGSPIFFANYTYIRERIMSYVRSEQDSNGGIIEHIILDMSGVTSIDTTAIQGLLETNKIFEMNGMKMSIVNPRMDVLEKLIVSRFVDKIGKKSFFLTLDDAVKASNLLTL* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1097 557 PANTHER SULFATE TRANSPORTER 3.5-RELATED 10 262 IPR030316 GO:1902358
Lan6g1097 557 PANTHER SULFATE TRANSPORTER 3.5-RELATED 263 553 IPR030316 GO:1902358
Lan6g1097 557 PANTHER SULFATE TRANSPORTER 10 262 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan6g1097 557 PANTHER SULFATE TRANSPORTER 263 553 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan6g1097 557 Gene3D STAS domain 414 553 IPR036513 -
Lan6g1097 557 ProSiteProfiles STAS domain profile. 433 552 IPR002645 -
Lan6g1097 557 ProSitePatterns SLC26A transporters signature. 108 129 IPR018045 GO:0008271|GO:0008272
Lan6g1097 557 Pfam STAS domain 438 548 IPR002645 -
Lan6g1097 557 CDD STAS_SulP_like_sulfate_transporter 435 545 - -
Lan6g1097 557 SUPERFAMILY SpoIIaa-like 435 551 IPR036513 -
Lan6g1097 557 Pfam Sulfate permease family 79 261 IPR011547 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1097 Lan-Chr6 10635163 10640297 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1097 263 551 Inorganic Solute Cotransporters AT5G19600 57.931 1.88e-112 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1097 K17471 - zju:107431825 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1097 6 10635163 10640297 Lan6g1097 6 10635163 10640297 ECH