Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1093 ATGAAGAAAGAAACATACTCATCCCATTTTATTTCTCTTTTAATTTTCTTATTTCTAGGCACACTCTCCCTCTGTGCCTCCTCACACTATGAAACCCCACACAACAATCAACGCCAACTTCTCTACTACAAAGACGAGTTTGGTGACAGAGGAGAAAACATTACAGTAGACCCATCTCTTGTTTTTGAGAATAACCGTATCAGAAATGCTTATATAGCTTTACAAGCTTTGAAACAAGCTATTCATTCTGATCCATTGAACTTCACAACCAACTGGGTTGGATCCAATGTGTGTAACTACACTGGTGTTTACTGTGCACCTGCACTTGATAACCCTCAGATCCGTACAGTTGCTGGCATTGATCTTAACCATGGAGACATTGCTGGTTACTTACCAGAAGAGCTTGGGTTACTTACAGATCTTGCATTGTTCCATATTAACTCGAACAGATTCTGTGGCATTGTGCCACAGAGTTTTGAAAGGTTGCATCTTCTTTTCGAACTTGATCTTAGTAATAACAGGTTCGTTGGGAGGTTTCCGAAAGTTGTGTTAAGACTTCCTGAGCTGAAGTTTTTGGATCTGAGGTTCAATGATTTTGAAGGAGCTGTGCCGAGAGAGTTATTTGATAAGGATCTTGATGCAATATTTATAAACGATAACCGTTTTGTGTTTAATCTTCCTGATAACTTCGGAAACTCGCCGGTTTCGGTTATTGTTCTGGCGAACAACAAGTTTCACGGTTGCATACCAGCGAGTATTGGAAACATGTCGAACTTGAATGAGATTATTCTGATGAATAACGCGTTCCGTTCGTGTTTGCCATCGGAGATTGGGTTGCTGAAGAACATGACGGTGTTCGATGTTAGCTTTAACCAGTTGTTGGGTCCATTGCCTGATACTATTGGAAACGACGTGAGTCTTGAACAGTTGAATGTGGCTCATAATTTGTTGTCGGGGAATATTCCAGCGAGTATTTGTTTGTTGCCGAATTTGAAGAACTTTACTTATTCGTATAACTTCTTTACCGGTGAGCCGCCGGCGTGTTTGGGAGTGGCGGCGTTTGATGATAAGAGGAACTGCTTGCCGGCGAGGCCGTTGCAAAAGTCGGTAGCGCAATGTAAGTCGTTTTTGTCTAAGCCTGTTGATTGTTCATCGTTTGGATGTACGGCATTTGTTCCTTCACCTTCGACACCTTCCCCTTCTACACCACCTTCGACACCTTCCCCTAATACACCACCCTCTACACCTTCCCCAAATACACCACCCTCTACACCTTCCCCAAATACACCACCCTCTACACCTTCCCCAAATACACCACCCTCTACACCTTCCCCAAATACACCACCCTCTACACCTTCCCCAAATACACCACCCTCTACACCTTCCCCAAATACACCACCCTCTACACCTTCCCCAAATACACCACCCTCTACACCTTCCCCAAATACACCACCCTCTACACCTTCACCATCTTATCCTAATACACCTCCTTCTACACCTTCACCTTCTACACCACCATCATTACCCGGTGTAGGGCCTACACCTTCTCCACCATCAACACCTGGTATAGGGCCTACACCTTCTCCGACAACACCTATTTATACACCACCTGCTTACACTCCACAATCACCGCCACCACCGATGTATTCCGCTCCACCATCACCACCTGTTTATACCCCACAGTCTCCTCCACCACCACCACCAGTGTACTCGGCTCCGCCATCGCCACCCACTTCACCATACTACAGTTCACCCCCATTTTCAACTCAATCACCACCCCCGCCACCTAAGTCGTCTTCATTACCTTTGACTCCCTATTTATCACCACCGCCGCCGCCATCTCCTCCCCCAGTCAATTATTCACCACCATCTCCACCACCTTGTGAAGAACAACCCCCGCCAACTTATGACCAGCATTCACCTCCACCGCCTCCTCCTCCCACACCTTACCTTCCGCCACCATCCCCATCTCCCCCACCACCACCCGTCTATGCTTCTCCACCTCCACCGCCTCAATACAGTTCCCCACCACCACCACCATCACCGCCGCCGCCGGTTTATTACAGTTCACCTCCACCACCACCAGTTTACCATTCTCCACCACCACCAACACCAGTTTACCATTCTCCACCACCACCAGTTTACCGTTCTCCACCACCACCAGTATATCATTCACCACCTCCGGCACCTGTATACCATTCTCCACCACCGGCACCTGTATACCATTCTCCACCACCAGCACCAGTATACCATTCTCCACCACCACCGTCACCGCCTCCATGTGAAATACCACCTGTACCAGTATACGGGAACCCACCACCTGCACCAGTATATGAAGGTCCATTGCCACCTATCTTTGGAGTCTCATACTCATCACCACCACCACCACCCTTCTATTGA 2400 0.4767 MKKETYSSHFISLLIFLFLGTLSLCASSHYETPHNNQRQLLYYKDEFGDRGENITVDPSLVFENNRIRNAYIALQALKQAIHSDPLNFTTNWVGSNVCNYTGVYCAPALDNPQIRTVAGIDLNHGDIAGYLPEELGLLTDLALFHINSNRFCGIVPQSFERLHLLFELDLSNNRFVGRFPKVVLRLPELKFLDLRFNDFEGAVPRELFDKDLDAIFINDNRFVFNLPDNFGNSPVSVIVLANNKFHGCIPASIGNMSNLNEIILMNNAFRSCLPSEIGLLKNMTVFDVSFNQLLGPLPDTIGNDVSLEQLNVAHNLLSGNIPASICLLPNLKNFTYSYNFFTGEPPACLGVAAFDDKRNCLPARPLQKSVAQCKSFLSKPVDCSSFGCTAFVPSPSTPSPSTPPSTPSPNTPPSTPSPNTPPSTPSPNTPPSTPSPNTPPSTPSPNTPPSTPSPNTPPSTPSPNTPPSTPSPNTPPSTPSPNTPPSTPSPSYPNTPPSTPSPSTPPSLPGVGPTPSPPSTPGIGPTPSPTTPIYTPPAYTPQSPPPPMYSAPPSPPVYTPQSPPPPPPVYSAPPSPPTSPYYSSPPFSTQSPPPPPKSSSLPLTPYLSPPPPPSPPPVNYSPPSPPPCEEQPPPTYDQHSPPPPPPPTPYLPPPSPSPPPPPVYASPPPPPQYSSPPPPPSPPPPVYYSSPPPPPVYHSPPPPTPVYHSPPPPVYRSPPPPVYHSPPPAPVYHSPPPAPVYHSPPPAPVYHSPPPPSPPPCEIPPVPVYGNPPPAPVYEGPLPPIFGVSYSSPPPPPFY* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1093 799 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 5 6 528 - -
Lan6g1093 799 Gene3D Ribonuclease Inhibitor 233 361 IPR032675 -
Lan6g1093 799 SUPERFAMILY L domain-like 71 347 - -
Lan6g1093 799 Pfam Leucine rich repeat N-terminal domain 73 105 IPR013210 -
Lan6g1093 799 MobiDBLite consensus disorder prediction 396 685 - -
Lan6g1093 799 Gene3D Ribonuclease Inhibitor 68 232 IPR032675 -
Lan6g1093 799 PRINTS Proline rich extensin signature 396 412 - -
Lan6g1093 799 PRINTS Proline rich extensin signature 417 434 - -
Lan6g1093 799 PRINTS Proline rich extensin signature 436 461 - -
Lan6g1093 799 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 6 528 - -
Lan6g1093 799 MobiDBLite consensus disorder prediction 394 685 - -
Lan6g1093 799 Pfam Leucine rich repeat 142 199 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1093 Lan-Chr6 10611602 10614641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1093 28 396 Leucine-rich Repeat extension Gene Families AT3G24480 73.784 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1093 - - gmx:100814585 629.017