Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1089 ATGTCTGACTCTAAGTCAACTGGTAAGGTAATTAAGAAACACGAATCCAAAAAAGTTTCCAGTCTTGGCCATCAGCCTCCTAGGAAGCAACACCGCAAGGGTGAAAACCCCACAAGGCTGATATCTACTGATCAGTCTTCTGATTTTGGACATTCAAACTCTTGGATCTGTAAAAATGCTGCTTGTAGGGCGGTTCTATCTATAGATGACGCATTTTGTAGAAGGTGCTCTTGCTGTATTTGTCACCTGTTTGACGATAACAAGGATCCTAGTCTTTGGGTGGTGTGCACATCTGAATCTACTAAAGGGGGCTCCTGTGGGCTGTCTTGTCATATTGAGTGTGCCCTGCAACGTGAAAAAGTTGGAGTTGTTGATCATGGGCAACTGATGCAGCTAGATGGTGGCTACTGTTGTGCATCCTGTGGTAAAGTTACAGGGATACTTGGATGCTGGAAAAAGCAACTAATTATAGCAAAAGATGCCCGGCGTGTAGATGTACTCAGTTATAGGATATATTTGAGCTACAGGCTGCTGGATGGGACATCAAAATTTAAAGAATTGCATCAAATTGTAGTAGAGGCTAAGGCTAAACTGGAGACAGAAGTCGGTCCAGTTAATGGTGTTTCTGCGAAGATGGCACGAGGCATTGTCAGCAGACTATCTATTGCCAGTGACGTGCAGAAACTCTGTTCTCTTGCTATTGAGAAAGCTGATAGCTGGTTGGCCACTGTTCCCAGTGTAAATCCAGATTTCACAGATGGTTCACTTCCTGCTGCTTGCAAGTTTTTCTTTGAAGAGGTAACAGCTTCCTCAGTCAAAATCATTTTAATTGAAATATCAAATGTATCTTCTGAGGACATCAAGGGGTACAAGCTCTGGTATTACAAGAATGGGGAGGAATTGCTCACAAAAGAACCTGTTTCTGTGTTCCCCAAATCTCAGAGGAGGATTTTGATATCCAACCTTCACCCTTGCACTGAATATACTTTTCGGATTATGTCTTACACTGATTCAGGTGATCTGGGCCATTCCGAGGCCAAGTGTTTCACTAAGAGCATCGAGATAATTCAAAAGAATCCCTCTCCCTCTGTTGTTATGAATCAAATAAAAGAGAATCTTCAAACTGGAGGTAGTTCTTCTGGCTCCAAAATGGATCTCCATTCGACAATGGAAGATTCTGGATTTAAGGTTCGAGACCTTGGGAAAATTTTACGTTTTGCTTGGGCTCAAGAGCAAGGTTACTTTGAGGAGTTTTGTTGTGGTGATAAGAAAATTTGCGGTGGACAAAGTAAGATTGTCAAGCCAAAAATTCCGGAAGAGAAGTTGCCTCCAGTTTCACGAGACCTTGATTTAAATGTTGCTTCAGTTCCTGATTTAAATGAAGAGCTAACACCTCCTTTTGAGTCTTCCAGGGATGAACATAATGGTTGCACTTCACTGCAGGCAGTTGAGGCAGATGATGATGCTGCTTCTCGTGATATAGAGAAAAATGGTTTAGCAAGATCACATGGGAGTGGTGACTCACAAACCTGGACCCATGGTCCTGCCAGAGAAGTGCCAGCTGTTGAGTCTCATGTAGACGCAGGTCGGAAAAGGATAGCAAGCAGAAATGAAGAGACACATGATTGTGACAGCACTTTGATAAATGGCTCTCCTTTATGCAGATCTAGTGGTTCAATCTCTTTGGATGAGAACTTTGAGTATTGTGTGAAAGTAATTCGCTGGCTAGAATGTGAGGGTCACATCAAACAGGAATTTAGGTTGAAATTGCTAACATGGTTTAGTTTGAGGTCGACGGAACAAGAACGCAGGGTGGTTAATACCTTCATTCAAACTCTTATTGATGATCCGAGTAGTTTGGCAGGGCAACTGGTCGACTCTTTCTCTGACATTATATCCAACAAGAAGCCAAGAAATGGATTCTGTAATAAGACTGTGGAATCAAATTAA 1950 0.4231 MSDSKSTGKVIKKHESKKVSSLGHQPPRKQHRKGENPTRLISTDQSSDFGHSNSWICKNAACRAVLSIDDAFCRRCSCCICHLFDDNKDPSLWVVCTSESTKGGSCGLSCHIECALQREKVGVVDHGQLMQLDGGYCCASCGKVTGILGCWKKQLIIAKDARRVDVLSYRIYLSYRLLDGTSKFKELHQIVVEAKAKLETEVGPVNGVSAKMARGIVSRLSIASDVQKLCSLAIEKADSWLATVPSVNPDFTDGSLPAACKFFFEEVTASSVKIILIEISNVSSEDIKGYKLWYYKNGEELLTKEPVSVFPKSQRRILISNLHPCTEYTFRIMSYTDSGDLGHSEAKCFTKSIEIIQKNPSPSVVMNQIKENLQTGGSSSGSKMDLHSTMEDSGFKVRDLGKILRFAWAQEQGYFEEFCCGDKKICGGQSKIVKPKIPEEKLPPVSRDLDLNVASVPDLNEELTPPFESSRDEHNGCTSLQAVEADDDAASRDIEKNGLARSHGSGDSQTWTHGPAREVPAVESHVDAGRKRIASRNEETHDCDSTLINGSPLCRSSGSISLDENFEYCVKVIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDSFSDIISNKKPRNGFCNKTVESN* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1089 649 Pfam PHD - plant homeodomain finger protein 57 175 IPR032881 -
Lan6g1089 649 PANTHER VIN3-LIKE PROTEIN 1 4 645 - -
Lan6g1089 649 MobiDBLite consensus disorder prediction 498 531 - -
Lan6g1089 649 CDD FN3 286 340 IPR003961 GO:0005515
Lan6g1089 649 MobiDBLite consensus disorder prediction 1 38 - -
Lan6g1089 649 MobiDBLite consensus disorder prediction 1 49 - -
Lan6g1089 649 PANTHER VIN3-LIKE PROTEIN 2-RELATED 4 645 IPR044514 GO:0010048|GO:0040029
Lan6g1089 649 Gene3D Immunoglobulins 246 346 IPR013783 -
Lan6g1089 649 ProSiteProfiles Fibronectin type-III domain profile. 256 355 IPR003961 GO:0005515
Lan6g1089 649 SUPERFAMILY Fibronectin type III 265 345 IPR036116 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1089 Lan-Chr6 10537083 10552212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1089 53 640 PHD Gene Family AT3G24440 48.425 1.15e-177 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1089 - - gsj:114418583 1071.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1089 6 10537083 10552212 Lan6g1089 6 10537083 10552212 ECH