Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1085 ATGTATGGCGGTGACGAAGTATCAGCGATAGTGATTGATCTTGGGTCCCACACTTGCAAAGCTGGTTACGCTGGCGAAGATGCTCCTAAAGCTGTTTTCCCATCTGTTGTTGGTGCAATCGATCAAATGGACATCCATGGGCATGGTGATGCTGCAGAGAACATGGGAGCGGCTGTGGAGATACAAAACAATGCTAAAAGTCTTGATTCAGAGAAAACCAAGGGAAAATGCAAACTCTATGTAGGATCTCAGTCCTTAGGATACCGTAGGGATCATATGGAGGTATTGTCACCATTAAAGAATGGAGTTGTTGTTGACTGGAATATTGTAGACAACATCTGGGATCATGCTTTGAGGGAATGCTTATTAGTTGATCCCAAAGAGCGTCCAATGCTACTTGCTGAACCATGTTCTAACACACAAGAACAGAGAGAAAGGACAGCAGAACTTATGTTTGAAAAGTACCAAGTACCTGCACTGTTTTTGGCTAGGAACGCTGTCCTCACTTCTTTTGCTTCAGGGCGTGCTACATCATTAGTTATCGACTGTGGTGGAGGATCAACTACGGTTGCACCAGTACTCGATGGTTATGTTCTTCACAAGGGTGTGACAACTTCCCCTATTGGAGGAGACTTTCTGACAGAATGCTTGATGAAAAGTTTGGAAGGCAAAGGTATCAGAATAAGACCTCGGTATTCATTCAAGAAAAGGGAAATAAGGCCTGGAAATCTTCAGGCTATAAACCTTGATTTTCCACAAACAACAGAAAGTTACAAAGTCTACTCCCAGAGGGTGATTGCTAGTGATATCAAGGAATGTGTTTGCCGAGCACCAGATTCTCCATATGATGAGAGTGCATATGCTAACATTCCAACGACCTCATATGAGCTTCCCGATGGCCAGATAATTGAAATTGGATCTGACAAGTTCAAGATTCCAGATATTCTTTTTAATCCATCATTGGTTCAGACAATCCCTGGCATGGAGAGTTTTGCAGGAATTGCTCCTTCAATTCGTGGTCTTCCAAAAATGGTTATAGACAGCATTAATAAGTGTGATGTGGACATTCGAAGAGAACTATTTAGTAGCATACTGCTTGCTGGTGGTACAGCTTCAATGCAACAGTTGAAGGAACGCATTGAGAAAGACTTGCTAGAGGAGTCCCCTCAAGCTGCTAGAGTAAAAGTAATTGGCAGTGGAAATGCAACTGAAAGAAGGTTCAGTGTTTGGATTGGGGGCAGTATATTGGCTTCTCTTGGATCCTTCCAGCAAATGTGGTTCTCCAAGGCTGAGTATGAAGAGCAAGGTGCTTCCTACATCCAAAGAAAGTGCCCTTGA 1338 0.4312 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIHGHGDAAENMGAAVEIQNNAKSLDSEKTKGKCKLYVGSQSLGYRRDHMEVLSPLKNGVVVDWNIVDNIWDHALRECLLVDPKERPMLLAEPCSNTQEQRERTAELMFEKYQVPALFLARNAVLTSFASGRATSLVIDCGGGSTTVAPVLDGYVLHKGVTTSPIGGDFLTECLMKSLEGKGIRIRPRYSFKKREIRPGNLQAINLDFPQTTESYKVYSQRVIASDIKECVCRAPDSPYDESAYANIPTTSYELPDGQIIEIGSDKFKIPDILFNPSLVQTIPGMESFAGIAPSIRGLPKMVIDSINKCDVDIRRELFSSILLAGGTASMQQLKERIEKDLLEESPQAARVKVIGSGNATERRFSVWIGGSILASLGSFQQMWFSKAEYEEQGASYIQRKCP* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1085 445 CDD NBD_sugar-kinase_HSP70_actin 97 203 - -
Lan6g1085 445 SUPERFAMILY Actin-like ATPase domain 174 444 IPR043129 -
Lan6g1085 445 Gene3D - 3 181 - -
Lan6g1085 445 PANTHER - 2 444 - -
Lan6g1085 445 Gene3D - 182 384 - -
Lan6g1085 445 PANTHER ACTIN 2 444 IPR004000 -
Lan6g1085 445 Pfam Actin 4 444 IPR004000 -
Lan6g1085 445 Gene3D Actin; Chain A, domain 4 210 323 - -
Lan6g1085 445 Gene3D - 399 445 - -
Lan6g1085 445 SMART actin_3 7 445 IPR004000 -
Lan6g1085 445 SUPERFAMILY Actin-like ATPase domain 5 181 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1085 Lan-Chr6 10497096 10507751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1085 1 444 Cytoskeleton Gene Families AT3G12110 35.347 3.51e-88 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1085 K11340 - gmx:100819549 767.303