Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1063 ATGGCGACGCCGTTCACCGGACACTTGGACGGAGGAGGAGGACTGGCGGTGCTATCGAACGCCGTCAATAAGGTTGATTCTTCATCCTCCGTGCTCAATGGCGGCGCCGACTTGAAGAAGTGCGCTCAATTAGATTCGCCGATTTTGATTTTCTTGTTCTTCCACAAAGCGGTTCGGAATGAGCTCGACGCGCTTCACCGATTGGCTATGGCTTTTGCCACCGGTAACCGCTCTGACATTGATGCGCTCCGTGAGCGGTACCATTTCCTCAGCTCGATTTATAGGCATCACTCCAATGCGGAAGATGAGGTGATTTTTCCAGCTCTAGATATACGTGTGAAGAATGTAGCACAGACATATTCTCTTGAACACAAGGGTGAAAGCAATCTTTTTGATCATCTATTTGAGCTGTTAAATTCTTCCACCGATATTGGTGATAGTTTCCCGAGAGAGTTAGCATCATGCACGGGAGCTTTGCAGACGTCAGTTAGTCAACACATGGCGAAGGAAGAGGAGCAGGTATAA 525 0.4857 MATPFTGHLDGGGGLAVLSNAVNKVDSSSSVLNGGADLKKCAQLDSPILIFLFFHKAVRNELDALHRLAMAFATGNRSDIDALRERYHFLSSIYRHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNSSTDIGDSFPRELASCTGALQTSVSQHMAKEEEQV* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1063 174 Gene3D nmb1532 protein domain like 42 174 - -
Lan6g1063 174 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 32 174 - -
Lan6g1063 174 Pfam Hemerythrin HHE cation binding domain 51 173 IPR012312 -
Lan6g1063 174 PANTHER CHY ZINC FINGER PROTEIN 32 174 - -
Lan6g1063 174 CDD Hr-like 50 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1063 Lan-Chr6 10275286 10287589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1063 1 174 C2H2 Transcription Factor Family AT3G18290 63.043 8.02e-64 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1063 K16276 - lang:109349757 346.665