Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1061 ATGGCAGCTAAACGGTTTTTTGATGATTCTAACCAAGACCCTAATAAGCCAAACGATAAACGGATGAGACCTACTAGGCCTTCTTTTGCATCGGTGATTGGAGAAGTGGTTATGGTGAAAAACTTGCAAGGCCTTTTCTCAGGCTTGGAACCTTTGCTTAGAAGAGTGGTAAATGAAGAGGTGGAGCAAGCGATGAGGCGTTGTTATCTACCCTCGATGACTAGGTCTCCTTCATTGAGAATCCAAGCATCAGAGCACCCATCAAGCTTTCAACTCATATTCAACAAAAAGCTTTCGCTCCCAATATTCACCGGTAGCCGAATACTAGACATCGACGGGAATCCCATCCACGTGGTTCTCGTCGATAAAACTAGTAATCAGCAAATGGTTCCCACAAGTCTACCCCAAGCAATCAAGCTAGAACTTGTGGTTCTTGATGGAGATTTCCCTCATAGTGACAATGAGTCTTGGATGAGTGAAGAATTCAATAATCACATAGTGAAGGAGAGAACAGGGAAACGACCATTGCTTACAGGAGAATTGAATCTTACCATGAGGGATGGTATTGCACCAATTGAAGACTTAGAGTTCACAGATAATTCTAGCTGGATACGTAGTCGAAAGTTTAGAGTTGCAGTGAGAGTTGCTTCAGAAAGTAATCAAGGTGTTCGAATTCGTGAAGGAATGACTGAAGCATTTGTTGTCAAAGATCATCGTGGTGAATTGTACAAGAAACACCACCCACCAATGCTGAAAGACGAAGTGTGGCGCCTAGAGAAGATTGGAAAAGATGGTGCTTTCCACAAAAAATTGTCCTTACATGGGATTAACACGGTCCAAGACTTTCTTAAGTTAAGCGTGGTTGACCCAAATAAGCTCAGAAAGATTTTAGGCATTGGGATGTCAGAGAAAATGTGGGAAGTGACAGTCAAGCATGCCAAGACTTGCATCATGGGCAACAAATACTACATCTTCCGTGGTCCTCATTTTACAATTGTTCTTAATCCCATATGCCAAATGATTAGAGCTGAAATCAATGGCCAAGTCTTTCCTGGGAGAGAGCTGAACAATATTACTAATAAGAGCTATATTCAGAAATTGGTCAGAGAGGCATATGCTACATGGAATAACTTGGAGGAACTTGATGGGGTTTTGAATGATAATGTTGCTTTATTAAACCAACGTGAAACTGTGGAGCAATTACCAAACAATCATCAAGCACAAGTAGTAGCATATGATCAGAACGACTATTTTGGTGAAAAATCAACTATGGAGGTTGACAACTATGAGTGGCCAGTGAATACAACATTTGCCACAACACCATCGGTGAATCAATTAGGCATGGCTTTCAACTTCTCAGAGACACACTCAGAGGATGCTATAACCCCAGGCCCAGGTTCTGTATTTAATGGGAACCCAAGGTGGCATTAG 1431 0.4179 MAAKRFFDDSNQDPNKPNDKRMRPTRPSFASVIGEVVMVKNLQGLFSGLEPLLRRVVNEEVEQAMRRCYLPSMTRSPSLRIQASEHPSSFQLIFNKKLSLPIFTGSRILDIDGNPIHVVLVDKTSNQQMVPTSLPQAIKLELVVLDGDFPHSDNESWMSEEFNNHIVKERTGKRPLLTGELNLTMRDGIAPIEDLEFTDNSSWIRSRKFRVAVRVASESNQGVRIREGMTEAFVVKDHRGELYKKHHPPMLKDEVWRLEKIGKDGAFHKKLSLHGINTVQDFLKLSVVDPNKLRKILGIGMSEKMWEVTVKHAKTCIMGNKYYIFRGPHFTIVLNPICQMIRAEINGQVFPGRELNNITNKSYIQKLVREAYATWNNLEELDGVLNDNVALLNQRETVEQLPNNHQAQVVAYDQNDYFGEKSTMEVDNYEWPVNTTFATTPSVNQLGMAFNFSETHSEDAITPGPGSVFNGNPRWH* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1061 476 MobiDBLite consensus disorder prediction 457 476 - -
Lan6g1061 476 Pfam Calmodulin binding protein C-terminal domain 321 380 IPR046829 -
Lan6g1061 476 Pfam Calmodulin binding protein-like N-terminal domain 90 238 IPR046831 -
Lan6g1061 476 PANTHER PROTEIN, PUTATIVE-RELATED 1 468 - -
Lan6g1061 476 MobiDBLite consensus disorder prediction 1 26 - -
Lan6g1061 476 MobiDBLite consensus disorder prediction 1 23 - -
Lan6g1061 476 Pfam Calmodulin binding protein central domain 250 316 IPR046830 -
Lan6g1061 476 PANTHER OS02G0177800 PROTEIN 1 468 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1061 Lan-Chr6 10234740 10238145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1061 3 383 Calmodulin-binding Proteins AT5G57580 50.129 1.39e-119 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1061 - - gmx:100802257 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1061 6 10234740 10238145 Lan10g0437 10 3120494 3123204 PCT
Lan10g0437 10 3120494 3123204 Lan6g1061 6 10234740 10238145 PCT