Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1059 ATGAATATCCAACGGCCTCTTCTCTTCTTCGTACTCTTTTTCGTAACCGCATTCTCCACCCTCAACGCCGCCGTCGCCGCCGATTACTACGGCGGCTCCACCGATTTCATCCGCAGCAGTTGCAACACCACACTCTACCCGGACATCTGCTTCACCTCCCTCTCTCGCTATGCCAATGCCGTACAACAAAACCCTGGCCAACTCGCTCGCGTCGCAATCTCCGTAACGCTCTCCAAGGTTCACCGCGTCGCCTCCTACGTCTCGAATCTCACGCGCGAGGCCGACTACAGCGCCGACACACGCGCCGCGTCTGCAATCCACGACTGCTTCACCAACCTCGACGACGCCGTCGACCAAATCCGCGGATCTCTTAAGCAGATACGGCAGATTGGCGCTGTCGGAGCCGGCGCCGGGTCGTTCCTGTTTCAGATGAGTAACGTGCAGACGTGGATGAGCGCGGCGCTCACTGATGAAGAAACTTGTACGGACGGATTTCAAGATGTAGATGATTGTAAGGTGAAGACGCAGGTATGTGATCGTGTCTCGAATGTGAAGAAGTTCACGAGTAACGCTTTGGCGCTCGTGAATAGTTATGCTAACAAAGGAATGCCTTGA 615 0.5528 MNIQRPLLFFVLFFVTAFSTLNAAVAADYYGGSTDFIRSSCNTTLYPDICFTSLSRYANAVQQNPGQLARVAISVTLSKVHRVASYVSNLTREADYSADTRAASAIHDCFTNLDDAVDQIRGSLKQIRQIGAVGAGAGSFLFQMSNVQTWMSAALTDEETCTDGFQDVDDCKVKTQVCDRVSNVKKFTSNALALVNSYANKGMP* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1059 204 Pfam Plant invertase/pectin methylesterase inhibitor 35 194 IPR006501 GO:0004857
Lan6g1059 204 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 198 IPR035513 -
Lan6g1059 204 PANTHER PECTINESTERASE INHIBITOR-LIKE 6 201 - -
Lan6g1059 204 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 198 IPR035513 -
Lan6g1059 204 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 6 201 - -
Lan6g1059 204 SMART PMEI_2 32 194 IPR006501 GO:0004857
Lan6g1059 204 CDD PMEI-like_3 39 200 - -
Lan6g1059 204 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 198 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1059 Lan-Chr6 10209151 10210063 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1059 34 194 Carbohydrate Esterase AT5G53370 30.061 7.47e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1059 - - gmx:100812251 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0239 18 2705902 2706611 Lan6g1059 6 10209151 10210063 LSH