Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1053 ATGGAGAGAGATTTCATGGGTCTAAGCTCAAAAGAACCACTTGCGGTGGACAAGGAAGAGATCAACGATGAATCAGGCTTCGTAAAGAACTCGGCTGCACAATGGCTCTTCTCCAACAAAGTCTCTGCAGTTCCACATTTGATGTCCTTCAAGGCTTATCAAGATGACAAGGCTAAAAAGATGGTGACAAATATTAGTGCAGATGCATTTGATTCTAGTAAAAAACACTCCTATGGTGAACCCCTGAAATCTTTCAACCATGATGCACAAGGTGGCTTTCATTTTTCCCTGACTCCGTATCCTGTACAACATGATGTGAATTCTGTGAATCGTCCTCATGATGTGAAGATGTTTTCAGTTTCCAATCAGGCAGTCACCGGGAACCCATTCCTGAAGAGTCATTTTGCAACTGCTGGTCCGAATATGAATGGTGTTAATGTGAAGCAGCCACTATTTGGGGGAATACCCGTTACAGCATCTCATTCAGTTCTTCCCACCATTGGTTCTATTGCTGCAATGACTGAATCATGTAATGGCGTGAAACCATCTGCACCTTCTGCTCAACTTACCATCTTCTATGGGGGCACTGTCAATGTCTTCGATGATATCTCTGCTGAGAAGGCGCAAGCAATCATGTTAATGGCTGGCAATGGCTTTTCTGCTGTTTCTAACACGGAACAGTCAAAAGTTCAGGCACCTGGCTCAAAGTTGACAGCTGGTGATTGTGTGCCTGTGAGTCAAGCTGCAAGTGCAGCACCGAGCTCCGGTCTTTCAAGTCCTTTATCCGTTTCGTCACATACCGGTGCACAGTCAGGGAGTGGCTCAACTAGCACTGATGAATTTCTGACAGCTAAACCAACAGGAGCTACCACCACTCCTGTCAGCAATGTGGAGCCTCCAAAAGTAGTCAATGTAACCACTATGTTGACATCAGCTGTGCCACAGGCTCGCAAAGCATCCTTGGCTCGGTTTTTGGAAAAGCGTAAGGAAAGGGTGATGAGTGCAGCACCATACAAAAAACCTGAGGAGTTTTCCACTGCAGAAAACAATGGTGCTAACTTCCATGCAATTACTGCTTCTAATACTCTTCCACCCAAGCAATAA 1104 0.4529 MERDFMGLSSKEPLAVDKEEINDESGFVKNSAAQWLFSNKVSAVPHLMSFKAYQDDKAKKMVTNISADAFDSSKKHSYGEPLKSFNHDAQGGFHFSLTPYPVQHDVNSVNRPHDVKMFSVSNQAVTGNPFLKSHFATAGPNMNGVNVKQPLFGGIPVTASHSVLPTIGSIAAMTESCNGVKPSAPSAQLTIFYGGTVNVFDDISAEKAQAIMLMAGNGFSAVSNTEQSKVQAPGSKLTAGDCVPVSQAASAAPSSGLSSPLSVSSHTGAQSGSGSTSTDEFLTAKPTGATTTPVSNVEPPKVVNVTTMLTSAVPQARKASLARFLEKRKERVMSAAPYKKPEEFSTAENNGANFHAITASNTLPPKQ* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1053 367 SMART tify_2 182 217 IPR010399 -
Lan6g1053 367 Pfam Jas motif 314 338 IPR018467 -
Lan6g1053 367 ProSiteProfiles Tify domain profile. 182 217 IPR010399 -
Lan6g1053 367 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 18 360 IPR040390 -
Lan6g1053 367 MobiDBLite consensus disorder prediction 253 298 - -
Lan6g1053 367 Pfam tify domain 184 216 IPR010399 -
Lan6g1053 367 PANTHER PROTEIN TIFY 7 18 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1053 Lan-Chr6 10148105 10152276 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1053 35 346 Tify Gene Family AT3G17860 35.882 1.76e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lan6g1053 tify 1.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1053 K13464 - gmx:100807043 435.647