Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1027 ATGGATCCACCACTGATACCACTTTCTCTCTCCACCGTCACAACCACCGTACAAAACCACCCTGACTCCATAGAATCATCTCCTAACTACCACATTGTTAACAACGAAACATGGGCAGATAATCACGACCCTCTCCCCAATGTCCCTAACGCCAAACTCCGCCTCATGTGCAGCTACGCCGGCCACATCATGCCACGTCCTCACGACAAGTCCCTCTCATACGTCGGCGGCGAAACCCGCATCGTCGCCATCGACCGTCACACTTCTCTCAAAGACCTATGTTCACGTTTATCACATTCTCTTCTCCATGGAAGAGCTTTCACTCTCAAGTACCAACTACCAAACGAAGAACTTGATAATCTAATAACTGTAACAACTGATGAGGATCTTGATAACATGGTTGAAGAGCATGATCGTTTGGCTTCTTCGAAACTGTGTCCTTCTTCGCGTCTTAGGGTTTTCTTGTTCTTCAGTAAACCTGATACTGCGGTTTCGATGTGTTCGCTTATGGATGATGTGAAATCAGAGACGTGGTTTGTTGATGCTCTGAATAACTGTGGGATTCTTCAACGTGGTGTTTCGGATTCTGCTGCAGTGGATCAATGTCTGGTTAATCTTGATGGAGTTCATGAAACCAATGATTTGGAGGCTCAGGTAATTGTTGATTCTACTCCCACCACTGTGGTGGATAGTACCAAGGAGGTTAAGCAAGAGTTGCATTCAGTGGAGAATAATTCATCTTATGGTTCCTCCTCTTCAGCATCTTCAATGGCTAATTTGCCTCCAATAACGGTTCATGGTGTTGATGTGAATGGTTGTGGCAGGATTCAGGAACAGTTTGCACAAATGAGTTTTGGTACAAATGGGCTGAGGCATAACTTGCTGGATGATGGTTATGCTATATCTTCTGCTGCTACTCCTATGAATGCAATTCCTGAAGCTGTGAGGAATGTAGTTAATACTAATAATAATAATAATGTGAATCTGGTTAATGTGTCTGATGATGATAAATCAGATCATAATGGAGGACTTGGTGGATATAGAAAGCCCCCTATACCATTGCAGCTTGTGCAGTCTAGGACTTTCAATGCAACTTGTGGTGGTTTTGGTTTGGCTTCTCCAGATTCAGTTGCAAGTGAGAGCAGCATTGCATCAGCAAATTCTTTCTCAAAGACTGTTTACTATCATCATGAACAACTCCAACCTCCACAAATGGACAACAAAGCTCCTCCTACGCCAAATATCAAGACTGAAATATCTGAACACACCCCTACACTACAAAGGGAGCAAATTCAGGTTCAAGATTCAGGTTACACTTTATCTCAACAACAATTGAATCAAACTCAGCAACCCCAACATCATCATCATCAACAGCAACAGCAACAGCAACATCAACATCAACAATTTGTCTACATTCACCATCCTACAGCAACAGGACAAGTGCCTACAATGTCATCATACTACCCACTTTATCCCCCACCATCACAACAACAACTTCATCATGCAATTAGTCAGCAACAATATCCACTTTATGTAATGCCTGTGGGACCTAAACAACATGTAATACCCCAAGGTGCTGCAGCCTCAGCAGTATATAAGGATGGTGACCCACCAATTTACCCTACTAAGTTAGCTACCCCAACTATATCTGAAGTTGGTCCAAATGTTTACAAAGCCACTATGGCATCAAATCCTGCATTTGTTCATATACCCCCTAACCGATTTCAGCAACAGTATGTGACTTTGCCTCAAAATATCCATCATCAAACACACCCTATTGCAATAGCTCCCTCTGCCACTACTAATTATGGTTATGATCAATATGATGGACCTATCCAAGACCAAGTATACTATACTCAACAGCCCCCACAATACCAATCCATGACCCCAGCTGCTGCAGCTGCAGCACTATCAGATGTTTCAGAACAATTTCCTATAGACAATACTCAGTATCCAAACAGAGATTCACAGCCAGTATAG 1980 0.4283 MDPPLIPLSLSTVTTTVQNHPDSIESSPNYHIVNNETWADNHDPLPNVPNAKLRLMCSYAGHIMPRPHDKSLSYVGGETRIVAIDRHTSLKDLCSRLSHSLLHGRAFTLKYQLPNEELDNLITVTTDEDLDNMVEEHDRLASSKLCPSSRLRVFLFFSKPDTAVSMCSLMDDVKSETWFVDALNNCGILQRGVSDSAAVDQCLVNLDGVHETNDLEAQVIVDSTPTTVVDSTKEVKQELHSVENNSSYGSSSSASSMANLPPITVHGVDVNGCGRIQEQFAQMSFGTNGLRHNLLDDGYAISSAATPMNAIPEAVRNVVNTNNNNNVNLVNVSDDDKSDHNGGLGGYRKPPIPLQLVQSRTFNATCGGFGLASPDSVASESSIASANSFSKTVYYHHEQLQPPQMDNKAPPTPNIKTEISEHTPTLQREQIQVQDSGYTLSQQQLNQTQQPQHHHHQQQQQQQHQHQQFVYIHHPTATGQVPTMSSYYPLYPPPSQQQLHHAISQQQYPLYVMPVGPKQHVIPQGAAASAVYKDGDPPIYPTKLATPTISEVGPNVYKATMASNPAFVHIPPNRFQQQYVTLPQNIHHQTHPIAIAPSATTNYGYDQYDGPIQDQVYYTQQPPQYQSMTPAAAAAALSDVSEQFPIDNTQYPNRDSQPV* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1027 659 MobiDBLite consensus disorder prediction 410 426 - -
Lan6g1027 659 Pfam PB1 domain 68 156 IPR000270 GO:0005515
Lan6g1027 659 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 1 651 - -
Lan6g1027 659 MobiDBLite consensus disorder prediction 401 426 - -
Lan6g1027 659 CDD PB1_UP2 56 156 - -
Lan6g1027 659 SMART PB1_new 67 158 IPR000270 GO:0005515
Lan6g1027 659 MobiDBLite consensus disorder prediction 442 467 - -
Lan6g1027 659 PANTHER OS05G0427100 PROTEIN-RELATED 1 651 - -
Lan6g1027 659 Gene3D - 73 157 - -
Lan6g1027 659 SUPERFAMILY CAD & PB1 domains 68 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1027 Lan-Chr6 9783787 9787313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1027 52 185 MAP Kinase Kinase Kinase AT5G57610 42.963 2.32e-27 116