Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1011 ATGAAGAACATTCTTAAGAAGCTTCATATCATGTCTAACCAATCAGAAGATGCAGCAGCACAAGGGTCTACTACTTCATCTAGGGGAAACAAGTCCAATGATGGTTCATCTACTCCTAAGAAGATTTCAAATTGGTTGCATTCAGTTTCTAATAGGCAAAGTCAAAGTCCTCCATCTCCTGACTTGGCTATAGGAGAAAGAGGGGAACTATTTGATGCAGTGAGCAGTGGTGGTGGTGTTGGTTTGGATATTGTTTCTGATTCGATGAGGCACGATTCGGGGTCTAGCAGTTCAAGGGATCCTGAAGTGGAAGAAGAATATCAGATACAATTGGCTTTGGAGATGAGTGCAAAAGAGGATCCTGAGGCTGTTCAGATTGAAGCTGTTAAGCAGATCAGTTTAGGATCTTGTGACCCTGATAATACACCAGCTGAAGTCGTGGCATACCGATACTGGAATTACAATGCTCTTGGTTATGATGACAAGGTCTCGGATGGTTTCTATGACCTTTATGGGATCTTAACTGAGTCAACTTCAGCGAGAATGCCTTCCCTAGTAGATCTACAAGGAACACCAACCTCAGATGGTGTCACATGGGAAGCAGTCTTGGTCAATAGGGCTGCAGATTCCAATTTGTTGAAACTTGAGCGAAAAGCGCTAGAACTGGCAGGCGAGTTAAAAACAGATTTTGAAGTAGTCATAGATAGTAATTTGGTGATCAAGATTGCAATATTAGTGTCCGACTATATGGGTGGACCTGTTGAAGATCCTGCAAGCATGACTAGAGCATGGCGGAGTCTTTGTTACAGTCTAAAAGCAACCCTTGGTAGCATGGTTTTGCCACTTGGATCACTAACCATTGGATTGGCTCGACATCGTGCATTGTTATTCAAGGTATTAGCTGATAGATTGGGCATCCCGTGCCGGTTGGTGAAAGGACTGCAATATACTGGTTCAGATGATGTGGCAATGAACTTTGTCAGAATTGATGATGGAAGAGAGTACATTGTTGACCTAATGGCAGACCCTGGAACACTTATTCCAACTGATGCAACTGGGTCACTTATCGAGTATGATGAATCTTCTTTTGTAGCCAGTCATTCATCAAGAGACTTTGATTCCTCCCATATAGCATCATTCAGCAGCGGAGTTGGAAGTTTGTCTGAAGAAACTTTGGACTTCGGGACACCGGATAAAGGAAACAGATCAAAACATCTTGCATACACTGAGAAAGAACCTGAAGTAAGCAAGCCTGCTACAAGCAAGGAAGAATTAAAGAAACCATCAAGTGAATTAAAAAATAATACGAATGCAGAGAAGATCGTAGTGGGTGAATCTCCTAGCCGACCTAATTATCCATATATGCATGGAAGATCTCCTTCTTGGACTGAAGGCATCAGTTCCCCCGCAGTACGTAGAATGAAAGTCAAAGATGTTTCACAATATATGATTGACGCTGCAAAGGAGAACCCGAACCTAGCTCAAAAACTTCATGATGTTTTACTCGAAAGTGGTGTTGTTGCTCCTGCAAACTTATTTTCTGAAATTTACAACTTAGGTTCATCATCCGAGGCCAGTTTTCCAACTGAAGAAAAAGATGAATATAAACAGGGAAGTGTTCATCAAGAAACTAAGGCTTTATTTTTGCCTCCTTTGCCTCACCCCAGACTTCATCCCAAAGCAAGTCCAAGCAGTCAGGTTGAACATTCTAAGCCCATAGAAGGTTTAGGAACCGGCCTTCCTCTTGAAGCAAGGGCAAGTTCCGGACAGCACATACCATCTCAGGAAGAAGCAACTCTGGTAAAATATGGGAAAAATGTACCGGTTGCTGCAGCAGCAGCAGCTGCTGCTGTTGTTGCATCTTCTATGGTTGTTGCTGTGACTAAGTCAAACACTGAATCAAATATTGAGATTCCAGTAGCAGCAGCTGCTACAGCTGCAGCTGTTGTAGCAACTACTGCTGCTGTCAGTAAACAGTATGACCACGGCAGTCAGAGTGATGGAGATACGGATGGTGCTGGTTATGAGCCGAAAGTTAGCGGTGAAGGAGAGAATATTGCTTTGGGAGCAAACTCAGAAGGCGAGAGAATATCTGATAGATCAGTAGGTAATGAGAGCACAAGATCTGAATCCGCGCTAGATGATGTTGCTGAGTATGACATTCCATGGGAGGAAATCACATTGGGCGAGCGTATCGGACTTGGATCATATGGGGAAGTGTATCGAGGTGAACGACATGGAACTGAAGTTGCTGTAAAGAGGTTTCTTGATCAAGATTTCTACGGTGAATCACTTGAAGAGTTCAAAAGTGAGGTCCAAATAATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTAACTAGACCACCAAATCTTTCAATTGTCACTGAATTTCTTCCCAGAGGGAGTTTGTATAGATTAATTCACCGTCCTAACAATCAATTAGATGTTCGAAGGCGGTTGAGGATGGCCCTGGATGCTGCTCGAGGAATGAACTATTTGCACAATTGCACTCCAATGATAGTGCATCGTGATTTGAAGTCCCCGAATCTTCTTGTTGACAAAAACTGGGTTGTAAAGGTTTGTGACTTTGGTCTATCGCGAATGAAGAATAGTACATTTCTTTCTTCCAGATCAACTGCAGGAACAGCTGAGTGGATGGCTCCAGAAGTGTTGAGAAATGAGCTTTCAGATGAAAAGTGTGATGTTTATAGCTATGGGGTCATATTATGGGAGCTCTCTACTTTGCAGCAACCCTGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTGGGTTTCCAACATCGTCGTCTCGACATTCCAGATGATATAGACCCTGCTGTTGCAGATATTATCAGGCAATGCTGGCAGACAGATCCAAAGTTGAGACCAACATTTGCTGAAATCATGACTGCTCTGAAGCCATTGCAGAAGCCAATTACTAGTTCTCAAGTGCCTAGACCAAGTGCTCAGTCATCAAGAGCTGCCGAAGACGCTGCAGGATAG 3021 0.433 MKNILKKLHIMSNQSEDAAAQGSTTSSRGNKSNDGSSTPKKISNWLHSVSNRQSQSPPSPDLAIGERGELFDAVSSGGGVGLDIVSDSMRHDSGSSSSRDPEVEEEYQIQLALEMSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKVSDGFYDLYGILTESTSARMPSLVDLQGTPTSDGVTWEAVLVNRAADSNLLKLERKALELAGELKTDFEVVIDSNLVIKIAILVSDYMGGPVEDPASMTRAWRSLCYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADRLGIPCRLVKGLQYTGSDDVAMNFVRIDDGREYIVDLMADPGTLIPTDATGSLIEYDESSFVASHSSRDFDSSHIASFSSGVGSLSEETLDFGTPDKGNRSKHLAYTEKEPEVSKPATSKEELKKPSSELKNNTNAEKIVVGESPSRPNYPYMHGRSPSWTEGISSPAVRRMKVKDVSQYMIDAAKENPNLAQKLHDVLLESGVVAPANLFSEIYNLGSSSEASFPTEEKDEYKQGSVHQETKALFLPPLPHPRLHPKASPSSQVEHSKPIEGLGTGLPLEARASSGQHIPSQEEATLVKYGKNVPVAAAAAAAAVVASSMVVAVTKSNTESNIEIPVAAAATAAAVVATTAAVSKQYDHGSQSDGDTDGAGYEPKVSGEGENIALGANSEGERISDRSVGNESTRSESALDDVAEYDIPWEEITLGERIGLGSYGEVYRGERHGTEVAVKRFLDQDFYGESLEEFKSEVQIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRPNNQLDVRRRLRMALDAARGMNYLHNCTPMIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKNSTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVYSYGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDDIDPAVADIIRQCWQTDPKLRPTFAEIMTALKPLQKPITSSQVPRPSAQSSRAAEDAAG* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1011 1006 SUPERFAMILY Protein kinase-like (PK-like) 711 976 IPR011009 -
Lan6g1011 1006 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 104 123 IPR003903 -
Lan6g1011 1006 ProSitePatterns Protein kinases ATP-binding region signature. 732 753 IPR017441 GO:0005524
Lan6g1011 1006 PRINTS Tyrosine kinase catalytic domain signature 800 813 IPR001245 GO:0004672|GO:0006468
Lan6g1011 1006 PRINTS Tyrosine kinase catalytic domain signature 839 857 IPR001245 GO:0004672|GO:0006468
Lan6g1011 1006 PRINTS Tyrosine kinase catalytic domain signature 886 896 IPR001245 GO:0004672|GO:0006468
Lan6g1011 1006 PRINTS Tyrosine kinase catalytic domain signature 905 927 IPR001245 GO:0004672|GO:0006468
Lan6g1011 1006 PRINTS Tyrosine kinase catalytic domain signature 949 971 IPR001245 GO:0004672|GO:0006468
Lan6g1011 1006 Pfam Protein tyrosine and serine/threonine kinase 726 978 IPR001245 GO:0004672|GO:0006468
Lan6g1011 1006 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 996 - -
Lan6g1011 1006 CDD STKc_MAP3K-like 732 978 - -
Lan6g1011 1006 Pfam Ethylene-responsive protein kinase Le-CTR1 144 347 - -
Lan6g1011 1006 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 996 - -
Lan6g1011 1006 MobiDBLite consensus disorder prediction 82 105 - -
Lan6g1011 1006 Gene3D Transferase(Phosphotransferase) domain 1 805 989 - -
Lan6g1011 1006 MobiDBLite consensus disorder prediction 658 711 - -
Lan6g1011 1006 ProSiteProfiles Protein kinase domain profile. 726 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1011 1006 MobiDBLite consensus disorder prediction 550 579 - -
Lan6g1011 1006 MobiDBLite consensus disorder prediction 983 1006 - -
Lan6g1011 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Lan6g1011 1006 MobiDBLite consensus disorder prediction 8 60 - -
Lan6g1011 1006 SMART serkin_6 726 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g1011 1006 Gene3D Phosphorylase Kinase; domain 1 719 803 - -
Lan6g1011 1006 MobiDBLite consensus disorder prediction 387 456 - -
Lan6g1011 1006 MobiDBLite consensus disorder prediction 395 430 - -
Lan6g1011 1006 MobiDBLite consensus disorder prediction 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1011 Lan-Chr6 9624291 9633254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1011 1 998 MAP Kinase Kinase Kinase AT1G73660 60.777 0.0 1140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lan6g1011 PK_Tyr_Ser-Thr 6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1011 - - gmx:100778331 1540.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0871 17 11019969 11029973 Lan6g1011 6 9624291 9633254 LSH
Lan6g1011 6 9624291 9633254 Lan3g0358 3 2616668 2625295 PCT
Lan3g0358 3 2616668 2625295 Lan6g1011 6 9624291 9633254 PCT