Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1005 ATGTGGATGGTGAGTTACAAAGAAGGCAGTGAGTTCAATTTGGCTGATTATGCATTCAATGGAAGGAAACTCAGGCCTCTCGTGCCAAGGCCAGTGACTTCTCCTAACAACACTTCTTCAGCTATAACCACTCCTTGCTTAACCCGTATTCATCATGGCAATGATTTCTTTTCACAATATCACAATCTGGCAGCATCAATGGTAGAGCAGGGAAAGAGAGAGTTGAATGGTCCACCAGTTGTGGTGAGTTCAAGGTGGAATCCAACACCAGAACAGCTAAGAGCACTTGAAGAATTGTATATGAGAGGGACAAGAACACCATCTGCTGAACAAATCCAGCAAATCACTGCACAGCTAAAAAGGTTTGGCAAAATTGAAGGCAAAAATGTTTTCTATTGGTTTCAAAATCACAAAGCAAGAGAAAGACAGAAACGACGCCGTCAAATGGAATCTGCTGCTGAGGGTCATCACTTTGATACTATACTTGAAAAGAAAGATTCAGGCACAAGTACAACCGTGTTTGAAGTTGAACAAACCAAGAACTGGGTACCCTCTACAAACTGCAGTACCCTTGCAGAGGAATCTGTCTCAATACAAAGGGCAGAAGAGGCAGCAAAAGCAGAAGTTTCAGAATGTAGAACAGATGGATGGTTCCAGTTTGATGAAGGAGAATTAGAGCAAAGAAGAAACTTCATGGAAAGGAATGCCACATGGCACATGATGCAATTACCTCCTCATCCTCCTACAGTTGTTGCACCCTACCTCATAAAAACTAGTACTCCTCTTAATACTTCTACTGTAACATCAAGGTTAATGGACCCAACAAGTCTCATTAAGAATCATCATAACCTCAGATTCTTTATTTCACCTCACAAATCAGAATTAAGCAGTATCAACAACAACAACAACACTGAGGATATTATTGAAAACTGTGCTGTGGAATCTCAAACCCTTCAACTTTTCCCTATAAGGAATGGAGATTGCAGCAGTGATAACAATAACCAACAGAAAGAGACAGACATATCAATTTCAGCAATGAATGCTCCTCCTAGCCAGTTTATTGAGTTCCTTCCATTAAGGAGCTAA 1086 0.407 MWMVSYKEGSEFNLADYAFNGRKLRPLVPRPVTSPNNTSSAITTPCLTRIHHGNDFFSQYHNLAASMVEQGKRELNGPPVVVSSRWNPTPEQLRALEELYMRGTRTPSAEQIQQITAQLKRFGKIEGKNVFYWFQNHKARERQKRRRQMESAAEGHHFDTILEKKDSGTSTTVFEVEQTKNWVPSTNCSTLAEESVSIQRAEEAAKAEVSECRTDGWFQFDEGELEQRRNFMERNATWHMMQLPPHPPTVVAPYLIKTSTPLNTSTVTSRLMDPTSLIKNHHNLRFFISPHKSELSSINNNNNTEDIIENCAVESQTLQLFPIRNGDCSSDNNNQQKETDISISAMNAPPSQFIEFLPLRS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1005 361 Gene3D - 81 144 - -
Lan6g1005 361 CDD homeodomain 85 145 IPR001356 GO:0003677
Lan6g1005 361 SUPERFAMILY Homeodomain-like 84 150 IPR009057 -
Lan6g1005 361 ProSiteProfiles 'Homeobox' domain profile. 89 144 IPR001356 GO:0003677
Lan6g1005 361 SMART HOX_1 81 148 IPR001356 GO:0003677
Lan6g1005 361 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 40 360 - -
Lan6g1005 361 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 40 360 IPR044555 GO:0003700|GO:0099402
Lan6g1005 361 Pfam Homeodomain 84 143 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1005 Lan-Chr6 9579489 9582784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1005 1 361 Wox Gene Family AT3G18010 39.186 1.20e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lan6g1005 Homeodomain 9.1e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1005 - - gmx:100777274 522.316