Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1002 ATGCCGCACTATCTTCCCCACACTTTCTCCAACTCATTCATTTTATTCAGGATCAGAGAGAAGAGACAAAGACCGGTAATGTCAACACAATATGAAAGATTTTCAAAGGATTTTCTAATGGGAGGAGCAGCAGCAGTCATATCGAAGACTGCAGCGGCACCAATTGAGAGAGTTAAGCTTTTATTACAAAATCAAGGTGAAATGATTAAACGAGGACAACTCAAGAAACCATACCTGGGTCTATCGCATACCTTTAAGAGGGTCTTCATGGAAGAAGGTCTGATTGCTTTTTGGAGAGGTCACCAGGCCAATGTTATTCGATATTTCCCCACACAGGCTTTCAACTTTGCATTCAAAGGTTACTTTAAAAGAATTTTCGGGCATTCCAAAGAGAGAGACGGTTACATTAAGTGGTTTGCTGGAAATGTGGCTTCAGGCAGTGCTGCAGGAGCTACCACTTCACTGTTTTTGTATCATTTAGATTATGCACGCACACGATTGGGAACTGATTCATTGGAGTGCCGTGCCACTGGTCAGCGCCAGTTTAAAGGACTAGCTGACGTATACCGTAAAACCTTATCAAGTGATGGAATCGCTGGTTTGTACAGGGGTTTCAGTGTTTCAATATTGGGAATCACAATGTATCGAGGAATGTACTTCGGGCTCTATGACACCTTGAAGCCTATTGTTTTAGTTGGGCCTTTCGAGGGGAACTTTTTTGCTAGTTTCTTGTTAGGTTGGAGCATTACAAGTTCTGCAGGGGTTTGTGCATATCCTTTTGATACACTACGCCGAAGAATGATGCTAACATGTGGACAGCCAAACAAATATAAAAATGCAATGCATGCATTTCACGAGATCGTTCAACAAGAGGGTTTCTCAGCTCTATTTCGAGGAGTTAAGGCAAATATGCTTCTTGGTGTGGCAGGAGCTGGGGTGCTCGCCGGATATGATCAACTGAGCCATATTTTATCTAGACATGATCACTATAATAAGACAAACCAAAGAGTTTTGTGA 1017 0.4218 MPHYLPHTFSNSFILFRIREKRQRPVMSTQYERFSKDFLMGGAAAVISKTAAAPIERVKLLLQNQGEMIKRGQLKKPYLGLSHTFKRVFMEEGLIAFWRGHQANVIRYFPTQAFNFAFKGYFKRIFGHSKERDGYIKWFAGNVASGSAAGATTSLFLYHLDYARTRLGTDSLECRATGQRQFKGLADVYRKTLSSDGIAGLYRGFSVSILGITMYRGMYFGLYDTLKPIVLVGPFEGNFFASFLLGWSITSSAGVCAYPFDTLRRRMMLTCGQPNKYKNAMHAFHEIVQQEGFSALFRGVKANMLLGVAGAGVLAGYDQLSHILSRHDHYNKTNQRVL* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1002 338 PANTHER ADP,ATP CARRIER PROTEIN ER-ANT1 27 334 - -
Lan6g1002 338 Gene3D Mitochondrial carrier domain 35 330 IPR023395 -
Lan6g1002 338 PRINTS Adenine nucleotide translocator signature 34 46 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lan6g1002 338 PRINTS Adenine nucleotide translocator signature 78 99 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lan6g1002 338 PRINTS Adenine nucleotide translocator signature 111 123 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lan6g1002 338 PRINTS Adenine nucleotide translocator signature 137 150 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lan6g1002 338 PRINTS Adenine nucleotide translocator signature 242 258 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lan6g1002 338 Pfam Mitochondrial carrier protein 33 128 IPR018108 -
Lan6g1002 338 Pfam Mitochondrial carrier protein 138 229 IPR018108 -
Lan6g1002 338 Pfam Mitochondrial carrier protein 238 326 IPR018108 -
Lan6g1002 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 32 125 IPR018108 -
Lan6g1002 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 137 229 IPR018108 -
Lan6g1002 338 SUPERFAMILY Mitochondrial carrier 32 320 IPR023395 -
Lan6g1002 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 237 323 IPR018108 -
Lan6g1002 338 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 27 334 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lan6g1002 338 PRINTS Mitochondrial carrier protein signature 37 50 IPR002067 GO:0055085
Lan6g1002 338 PRINTS Mitochondrial carrier protein signature 50 64 IPR002067 GO:0055085
Lan6g1002 338 PRINTS Mitochondrial carrier protein signature 100 120 IPR002067 GO:0055085
Lan6g1002 338 PRINTS Mitochondrial carrier protein signature 152 170 IPR002067 GO:0055085
Lan6g1002 338 PRINTS Mitochondrial carrier protein signature 202 220 IPR002067 GO:0055085
Lan6g1002 338 PRINTS Mitochondrial carrier protein signature 246 268 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1002 Lan-Chr6 9561903 9565545 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1002 32 327 Antiporters AT5G17400 77.703 1.29e-168 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1002 K05863 - gmx:100798418 534.643