Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0976 ATGGAAGGTAGAATGATAGAAGATTTATTAATAATAGGAGGGTTGATAGGGGTGCAATTTGTTTATGCTGGAAATGCTGTGTTGTTGAGTTATCTTATGTCTTTGGGTCTCAACTCTCTTACCATTGTTATTTTCTGTTCCTTTGCTACATTCCTTGTTCTTCTCCCTGTTGCTTCTTATTATGAAAGGAGTATATGGCCCAAGAAGTTCAGATTCAAGTTGTTTATACAGATACTCTTGCTTTCATTTGGAGGGGTAACTTTGTTCCAATCTTTGATCCTTAAAGGAATCAACCTAACCTCACCAGCAATGGGAACTGCCATGCCAAACCTTGCCCCTGGCCTTATCTTCATAATAGCATGGACATTGCGGTTGGAAAAAGTGGACTTAAGCTGCACATATAGTAAAGCAAAAATCATTGGCACCTTGCTTTGTGTCTTAGGGGCTCTCACAATGAGTTTAATGTCAAGTATTTCTATTTCTGCACCAAATAAAGAGACAACATTTCAATTATCATCTCCACCACCAAATATTTTATTAGATAAACAGAAGATAATTGGTTGCTTCTATCTCTTAGCCGCAGTGCTCATTTTCTCTAGCAGCATTGTCCTGCAGGCTTTTATTCTAGGAGATTTTCCTGCACCCATGTCCTTATGCGCGACAACGTCGCTTTTCGGGGCGTTCATGACTGCAACAGCTCAATTACTTCAAGATCATGAATTCAAAACTAGTTGGCCACTTATGAGTGTTGGAGAAGTGATTTCCTATTCTCTTCTGGCAGGCTGTGTTAGTGGGATATGCCTAAGCTTCCATGGTTGGGCACTTAAGAAGAGAGGTCCAGTCTTGGTGTCCATGTTCAGCCCCATTGGCACACTCTGCTCAGTCATTCTCTCCTATTTTACACTAGGAGACACCATTACTATTGGAAGCTTTGCAGGTATGATCCTCATGTTCAGTGGTCTCTACTTTGTGCTTTGGGCCAAAGGGAAAGAAGGGTATGCAAGTAAAGATGGCTTAGATGCAGAGAGGCCTCTCTTATGTTGA 1044 0.4119 MEGRMIEDLLIIGGLIGVQFVYAGNAVLLSYLMSLGLNSLTIVIFCSFATFLVLLPVASYYERSIWPKKFRFKLFIQILLLSFGGVTLFQSLILKGINLTSPAMGTAMPNLAPGLIFIIAWTLRLEKVDLSCTYSKAKIIGTLLCVLGALTMSLMSSISISAPNKETTFQLSSPPPNILLDKQKIIGCFYLLAAVLIFSSSIVLQAFILGDFPAPMSLCATTSLFGAFMTATAQLLQDHEFKTSWPLMSVGEVISYSLLAGCVSGICLSFHGWALKKRGPVLVSMFSPIGTLCSVILSYFTLGDTITIGSFAGMILMFSGLYFVLWAKGKEGYASKDGLDAERPLLC* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0976 347 PANTHER WAT1-RELATED PROTEIN 10 341 IPR030184 GO:0016021|GO:0022857
Lan6g0976 347 Pfam EamA-like transporter family 186 325 IPR000620 GO:0016020|GO:0016021
Lan6g0976 347 PANTHER WAT1-RELATED PROTEIN 10 341 - -
Lan6g0976 347 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0976 Lan-Chr6 9168617 9171782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0976 1 342 Nodulin-like Gene Family AT5G47470 55.102 5.02e-133 382
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0976 6 9168617 9171782 Lan17g0947 17 13144365 13148827 LSH
Lan17g0418 17 3104304 3108150 Lan6g0976 6 9168617 9171782 PCT
Lan6g0976 6 9168617 9171782 Lan17g0418 17 3104304 3108150 PCT