Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0952 ATGGCTGTACCCATTCAGACTCAACTACATGTATGGCTATTTGTTGGGTTTGTTTCATCTGTTGTTGGATTGCTTTGTTATGCTCTCAGCTCCTCCTTCAACCACCTATTTGGAGAGTGGAACCTTTTCAAAATCTTTCTCTATGTTATATTCAGTTTCATCATCTTCTTCATGACTTTGGTTGCAAAGGTATGGCAACGCTCAATGAGTATCTTGTTCAAAACTCATATGGCAATTTTACTCTTGTTAGCTACTTCTGTGTACTCAGTTTTCTATGATAAAGCTGTGAACCAAAAACCAGATGCATATATCTTGATCTCTTGTGCTGCTTTTGCTGTTATGTCTCTCAGTTTGTCAAAGCAAACTCAATTTGGATGTGAAGTGGATCTTCTAAATTTTTTCTTGGGATGTTTAATGGTACTACTTATGAAGAGAAATATGTGGTTATTTTTTGTTGGAGCAGGTTTTAGTTATTCCCTTATCATTATTAGTTCCTGGACAGATATCACACCCCAAAGTGAGGATTTTGAACTCCATGATCACTTGGTCATTCAAGTGGATTCACTTAGACATCAGGTACCAGATAAGATGCACAAATTGTTGGATAAAAACTGTGAACAAATTAAATCTTTGTTGAGAATGGAGTCAAAAGAAGTTCAAAAGCTTGGCATTTGGGGCATGGGTGGCATAGGTAAGACAACCGCTGCCAAAGCTGTTTTTCACGAACTGTCTTCCCAATTTGATTGTATTTGCTTTCTGGCAAATGTACATGAAGATTCAAATAGGCGTGGACTTAACTATGCTTGCAGTAGACTTTTTTCCGAGTTACTAGGGAGAGATGTTGATATTGATATTGACGCTCCCGAAATAGTACCCTCTAATGTTATGAGTATACTTGGGAATAAGAAAGTTCTAATCGTATTAGATGATGTGAATTCATCAGAATTTGTAGAGAAATTGATTGGAGCAAGGCATGATTGGCTAGGTGCTGGAAGCATAGTCATTTTGACAAGCAGAGATCGGCATGTGCTTATGAGCGCAAGAGTTGATGTGATTTATGAAGTCGAAGCAATGAACTTTCAAGACTCCCTTGACCTATTCAGCTTATATGCCTTTAACCAAACACATCCTGAAACAGAATATGAGGAACTATCAAAGACTGCAGTTAGTTATGCCAAAGGCATCCCCTTAGCTTTGGCAGTTTTGGGATCATCTCTTCAATGCAAAACTAAAAGCGCATGGGAAAGTATACTAAATAAACTAAGGATGATTCCCAATCCAAAAATTCAGGAAGTTATGATATTAAGTTTCAATAAATTAGCAGATGCAGAAAAAGAAATATTTCTAGATATTGCGTGTTTTTTTGAAGGGCGTCATATAGACCAAATATCAAGAGTATTAGATGCATGTGGTTTCTTTGCAGATATTGGGATTAAAATCCTTTTAGACAAGGCTCTTATAACTACTGATTCACACAGTTGTATAAAAATGCATGACCTCTTACAGGAAATGGGTCGTGATATTGTTTATCACGAATCTATCGAGAACCCTGAAGAACGGAGCAGACTGTGGAACTCTCCGGACGTCATGGATGTGCTGACAAATAATAGAGGAACAGATGCTGTTGAAAGCATGTTCTTGGATATGACTCAAATTCCTAATCTACACTTAAGCTCATATGCCTTCAAAAAGATGCCAAACCTAAGATTACTTGCTTTTGATAGCGGCAATAGTTCGATGATTAAGAATCATGTGAGCATTCCAGAGGGTCTTGAATTGCCTGCTAACTTACGATATCTGCAATGGGATGGATATCCATTGAACTCTCTACCATCAATTCGGTGGGAAAAGCTTGTTGATCTATCCATGCCACACAGCAACCTTCAAAAACTTTGGAATGGAGCACAGAATATGCCGATGCTAAAGAAAATTTATCTTCCTTTCTCAACGCTTCTGATAGAGTGTCCAGATTTGTCTGGTTCGCCAAATCTTGAATCTATCTCATTCCTTGGTTGTGAAAGTTTGGGACAATTTCATCAATCTATTTTCACTCTCCAAAAGCTTGAAGAATTAGATGTGAGTGGATGCACATCGCTTACCAGCCTTTGCAGCAAAACTTGTTCACCATCTCTCAAAAGATTGTATGCTGTGGGATGCACCAATCTCCAAGAGTGCTCAATCACAACACCGGGTGATCAATGCAAAACTCATTTGTATATGAAATTTTAA 2229 0.3795 MAVPIQTQLHVWLFVGFVSSVVGLLCYALSSSFNHLFGEWNLFKIFLYVIFSFIIFFMTLVAKVWQRSMSILFKTHMAILLLLATSVYSVFYDKAVNQKPDAYILISCAAFAVMSLSLSKQTQFGCEVDLLNFFLGCLMVLLMKRNMWLFFVGAGFSYSLIIISSWTDITPQSEDFELHDHLVIQVDSLRHQVPDKMHKLLDKNCEQIKSLLRMESKEVQKLGIWGMGGIGKTTAAKAVFHELSSQFDCICFLANVHEDSNRRGLNYACSRLFSELLGRDVDIDIDAPEIVPSNVMSILGNKKVLIVLDDVNSSEFVEKLIGARHDWLGAGSIVILTSRDRHVLMSARVDVIYEVEAMNFQDSLDLFSLYAFNQTHPETEYEELSKTAVSYAKGIPLALAVLGSSLQCKTKSAWESILNKLRMIPNPKIQEVMILSFNKLADAEKEIFLDIACFFEGRHIDQISRVLDACGFFADIGIKILLDKALITTDSHSCIKMHDLLQEMGRDIVYHESIENPEERSRLWNSPDVMDVLTNNRGTDAVESMFLDMTQIPNLHLSSYAFKKMPNLRLLAFDSGNSSMIKNHVSIPEGLELPANLRYLQWDGYPLNSLPSIRWEKLVDLSMPHSNLQKLWNGAQNMPMLKKIYLPFSTLLIECPDLSGSPNLESISFLGCESLGQFHQSIFTLQKLEELDVSGCTSLTSLCSKTCSPSLKRLYAVGCTNLQECSITTPGDQCKTHLYMKF* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0952 742 Pfam NB-ARC domain 205 422 IPR002182 GO:0043531
Lan6g0952 742 PRINTS Disease resistance protein signature 221 236 - -
Lan6g0952 742 PRINTS Disease resistance protein signature 298 312 - -
Lan6g0952 742 PRINTS Disease resistance protein signature 392 406 - -
Lan6g0952 742 PRINTS Disease resistance protein signature 683 699 - -
Lan6g0952 742 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 201 728 - -
Lan6g0952 742 Gene3D - 358 441 IPR042197 -
Lan6g0952 742 SUPERFAMILY "Winged helix" DNA-binding domain 428 533 IPR036390 -
Lan6g0952 742 Gene3D - 181 353 IPR027417 -
Lan6g0952 742 SUPERFAMILY L domain-like 546 724 - -
Lan6g0952 742 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 451 IPR027417 -
Lan6g0952 742 Pfam Leucine Rich Repeat 617 636 IPR011713 -
Lan6g0952 742 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 201 728 IPR044974 GO:0006952
Lan6g0952 742 Gene3D Ribonuclease Inhibitor 507 733 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0952 Lan-Chr6 8924126 8927193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0952 201 722 WRKY Transcription Factor Family AT4G12020 36.466 2.08e-83 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0952 - - lang:109349618 1478.77