Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0927 ATGGGTAACGGTGTCTCGAGCCTTTGTTCTTGTCTCGAACCGGCGAACCGGACGGAACGCGACGACGACGTTATTTTCTCAGCGGTCGAACCGTTAGATGAAACCCTAGGCCACTCTTTCTGCTACGTCAGATCCTCGAACCGGTTCCTCTCACCAACCCACTCCGACCGGTTCGTTTCTCCTTCAACCTCCTTACGCTTTTCTCCGACCCATGAACCCAAGACTCGACCCGATTCGCATGAAACCGGGTTCAAAGCCATTTCTGGAGCCTCCGTTAGTGCTAACAGCTCTATTCCCAAGACCGTTATCCAGTTAGAAAACAGCAACAATGGGAATAGCAACAATGCCTTAGACGACGCCGTTTTGGATCATGGTGCTGCCGTAATAGTTAATGGTTTTGAAGGGACGTCGTCGTTTAGCGCTCTCCCGCTTCAGCCCGTGCCACGTGGCGGTGAGCCTTACGAGAAGAGTGGTTTCTTTCTTTCTGGTCCGATTGAGAGTGGCGCCGCCGCATATTGCGGCGGCGCCAGTGGCGAGATTCCGTTTTCAGCGCCGCTGGGAGGGTTTTACGTGAAGAAGAGGAAGAACGGGATTTCGTCCTTCAGGAAGGCGTTCCACCGGAACAAATCATCGGAGAAGAAGCGACCGTGGGTGGTGCCGGTGTTGAACTTCGTTGGAAGAAAGGAAGTTCCGGCGGATGAGGTGAAGGAGGCGAAATCAGTTATGGAGACAAAGAATGAGAGCAATGTGCAGTGGGCGCTTGGAAAAGCCGGCGAGGATCGAGTTCACGTGGTTGTTTCTGAGGAGCAAGGGTGGTTGTTCGTTGGAATTTACGATGGTTTCAATGGCCCTGATGCGCCGGAGTTTCTGATGGGTAGCCTTTACCGTGCAGTTCACAATGAGCTTCAGGGTTTGTTTTGGGAAATTGAAGATTTAGAGGAGAGTATTAACCCTTCGAATTTGGGTGTTGCTGCTGAAAGTTCTGTGCTTGACGAGGTTAAGAACAATGAGGGTGCTGTAACTGAAATTGATGTTAAAAAAGACTCAAATCCGCGATCCGAGAAGAGGGTAACCTTCCAAGCGGACGGAACGGAAAGCAGAAGGCGTAGGCTCTGGGAATTTCTTGCCGAGGACCCTGAAGATGGACTTGATCTTTCGGGTTCTGATAGGTTTGCGTTTTCGGTTGATGATGCTCTTAGTGTTAACAATGGCCATGCAGGGTCAGCAGTTAGTAGAAGATGGCTTTTATTGTCGAAATTGAAGCATGGATTGTCAAAGCATAAAGAGGGTCATATTAGTAGGAAGTTGTTTGGGACTGAGGAGAAAGAGAAGGTTGAGGTGGAAAATCAAAATCGGGTAGAAGAGAAGCCATCTGGTGGCAGTAGTGGGAAGAAGAGGAAGGTTGGTCCTGTTGATCATGATTTGGTTTTGAGGGCAATGTCTAGGGCACTCGAAGCGTCTGAGCTCGCATATTTGGATATGACGGATAAGCTTCTTGCTTCAAACCCGGAACTTGCTTTGATGGGTTCATGCTTGTTAGTTGTGTTAATGAGGGATGAGGATGTGTATGTGATGAATGTTGGAGATAGCAGAGCGATTGTGGCACACTATGAGCCGAAAGAGGTTGATTCTAATGTGGAATTGGGAAGTAAAGGAGATAGGGGGTCGAACACAGGGAGTATAGTTGAGGAGTCCTTAGCTTTAGGTGAAGGTGAAAGTGCTAGCAAGTTGGGGAATGAGGGTCCTGCTCAAGAAATGAGGTTGGCCGCTTTGCAGCTGTCCACTGATCACAGCACTAGCATTGAAGAAGAAATAATTAGAATTAAGAAAGAACATCCTGATGATAGCCATTGTATAGTCAATGATAGAGTAAAAGGTCGTCTCAAGGTCACCAGAGCATTTGGGGCAGGATTTTTGAAGCAGCCAAAGTTGAATGATGCTGTGCTAGAAATGTTTCGTAATGAATATATTGGCACTGCACCATATATATCCTGCAGTCCTTCACTGCGTCACCATAGATTATACCCGACAGACCAGTTCCTGATCCTCTCATCTGATGGGTTATATCAATATCTTACAAATGAAGAAGTGGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCCGAAGGAGATCCTGCCCAACATTTAATAGAAGAGCTGCTCCTCCGTGCAGCTAAGAAGGCTGGAATGGATTTTCATGAGTTGCTGGATATCCCCCAAGGAGATCGAAGGAAATACCATGATGATGTAACTGTTATGGTGATATCACTTGAAGGAAGAATCTGGAAATCGTCGGGGAAGTATCTGTGA 2313 0.4747 MGNGVSSLCSCLEPANRTERDDDVIFSAVEPLDETLGHSFCYVRSSNRFLSPTHSDRFVSPSTSLRFSPTHEPKTRPDSHETGFKAISGASVSANSSIPKTVIQLENSNNGNSNNALDDAVLDHGAAVIVNGFEGTSSFSALPLQPVPRGGEPYEKSGFFLSGPIESGAAAYCGGASGEIPFSAPLGGFYVKKRKNGISSFRKAFHRNKSSEKKRPWVVPVLNFVGRKEVPADEVKEAKSVMETKNESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGSLYRAVHNELQGLFWEIEDLEESINPSNLGVAAESSVLDEVKNNEGAVTEIDVKKDSNPRSEKRVTFQADGTESRRRRLWEFLAEDPEDGLDLSGSDRFAFSVDDALSVNNGHAGSAVSRRWLLLSKLKHGLSKHKEGHISRKLFGTEEKEKVEVENQNRVEEKPSGGSSGKKRKVGPVDHDLVLRAMSRALEASELAYLDMTDKLLASNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYEPKEVDSNVELGSKGDRGSNTGSIVEESLALGEGESASKLGNEGPAQEMRLAALQLSTDHSTSIEEEIIRIKKEHPDDSHCIVNDRVKGRLKVTRAFGAGFLKQPKLNDAVLEMFRNEYIGTAPYISCSPSLRHHRLYPTDQFLILSSDGLYQYLTNEEVVSQVESFMEKFPEGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0927 770 PANTHER PROTEIN PHOSPHATASE 2C 17 768 IPR015655 GO:0004722|GO:0006470
Lan6g0927 770 PANTHER PROTEIN PHOSPHATASE 2C 29 17 768 - -
Lan6g0927 770 Pfam Protein phosphatase 2C 591 726 IPR001932 -
Lan6g0927 770 ProSiteProfiles PPM-type phosphatase domain profile. 238 758 IPR001932 -
Lan6g0927 770 CDD PP2Cc 472 758 IPR001932 -
Lan6g0927 770 Gene3D - 386 765 IPR036457 -
Lan6g0927 770 MobiDBLite consensus disorder prediction 53 83 - -
Lan6g0927 770 SMART PP2C_4 243 756 IPR001932 -
Lan6g0927 770 MobiDBLite consensus disorder prediction 447 468 - -
Lan6g0927 770 MobiDBLite consensus disorder prediction 53 70 - -
Lan6g0927 770 SUPERFAMILY PP2C-like 255 759 IPR036457 -
Lan6g0927 770 Gene3D - 226 381 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0927 Lan-Chr6 8636400 8641602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0927 1 770 PP2C-type Phosphatase Gene Family AT2G35350 56.897 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0927 - - mtr:MTR_4g098650 1025.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0927 6 8636400 8641602 Lan17g0987 17 13999368 14002017 LSH