Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0919 ATGGAGTTATCAAACACACTGATAGACTCATCAGCACCAACCTGCTGGTTATCTGATTTCGATATGGATGCTTATAATTTATTTTTGGAGGAATGCAACTTAGATATTGATGATAAAGAATTTCATTCACATGACATAGCAAGTGCAATGCAGGGGAACACAAGTAGCAACTCATCCAGCATCACTGAAAATTTGTCACCAAAAATTTCTCCTCCATCCTCAATTTTATCTTTTGATCAGTCTCAGATTCTGTCTTTTGACAACAACAACAACGCTCAGTTTTATGGGTTTGAAAGTACCTTAAACCCTCCAAAACAAAATGAGACGGTGTCAGTGTCATTGCCCAAGTTAGGAAATACACTTATCTCAGCTCAAACAACAGAAGGGGCCTCAACAAATCAAAAGTCTGAAACAAAAACCACATTTGGTAAGAGATCTGCATCTCATTCTCGTGATCACATAATGGCTGAGAGAAAACGAAGAAAGAAGCTTAGCCAGAGCTTCATTGCTCTTGCAGCCCTTATTCCTGGTCTAAAGAAGATGGACAAGGCTTCTATACTAGGGGATGCTATTAAACATGCTAAAGAGCTTAAAGAGCGTGTAGCAATTTTGGAAGAAGAGAGCAAACAGACAAGGGTGGTGGTTCTGAAGAAGCAACAAGTGAATATTGGAGATAACGATGATTCCTCATCATGTGATAATGAGAGCATTGAAAATGCAAGTGGCAGTGAACCACTCCTCCAAGTGGGAGCAAGAATTTCAGGGCAAGATGTGCTACTTCGGATCCATTGTCAAAGGCAAAAGGGTCTTCTGGTCAAAATATTGGAACAGATTCAAAGCCTGAACCTCTTTCTTGTTAATAGTAGTGTCTTACCCTTTGGAGATTCTACTCTTGAGATAATCTTCATTGCTCAGATGGGAAAAGATTACAATTTGAGCATAAAGGATCTTGTAAAGAACATACGCATGGCTACATTGAAGTGTTTGTCTGTCATAATAACGTGA 1005 0.392 MELSNTLIDSSAPTCWLSDFDMDAYNLFLEECNLDIDDKEFHSHDIASAMQGNTSSNSSSITENLSPKISPPSSILSFDQSQILSFDNNNNAQFYGFESTLNPPKQNETVSVSLPKLGNTLISAQTTEGASTNQKSETKTTFGKRSASHSRDHIMAERKRRKKLSQSFIALAALIPGLKKMDKASILGDAIKHAKELKERVAILEEESKQTRVVVLKKQQVNIGDNDDSSSCDNESIENASGSEPLLQVGARISGQDVLLRIHCQRQKGLLVKILEQIQSLNLFLVNSSVLPFGDSTLEIIFIAQMGKDYNLSIKDLVKNIRMATLKCLSVIIT* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0919 334 Coils Coil 187 214 - -
Lan6g0919 334 MobiDBLite consensus disorder prediction 142 159 - -
Lan6g0919 334 MobiDBLite consensus disorder prediction 126 159 - -
Lan6g0919 334 Gene3D - 137 213 IPR036638 GO:0046983
Lan6g0919 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 148 197 IPR011598 GO:0046983
Lan6g0919 334 MobiDBLite consensus disorder prediction 126 141 - -
Lan6g0919 334 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 55 330 - -
Lan6g0919 334 MobiDBLite consensus disorder prediction 50 73 - -
Lan6g0919 334 Pfam Helix-loop-helix DNA-binding domain 153 197 IPR011598 GO:0046983
Lan6g0919 334 PANTHER BHLH TRANSCRIPTION FACTOR 55 330 - -
Lan6g0919 334 SMART finulus 154 203 IPR011598 GO:0046983
Lan6g0919 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 213 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0919 Lan-Chr6 8581038 8583337 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0919 67 324 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 41.288 5.04e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan6g0919 HLH 3.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0919 - - lang:109330753 390.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0919 6 8581038 8583337 Lan18g0259 18 3548832 3551841 LSH