Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0917 ATGCAACTCCTCTTCTTCCTCTTACCCTTCTTCCTCTACCTCCACCACTCCACCACCGCCCACACCCTCTCCGATTACCATTCCCTCCTCTCTTTCAAAACCACCTCCGTCACCTCCGACCCGACCCATTTCCTCTCCTCATGGACCCCATCAACCCCTTACTGCACCTGGCCAGGTATAACCTGCGACTCCTCAAACCGCCACGTCATCACTCTCAACCTCACCTCTCTTTCCCTCTCCGGCACCATCACCACCCTCCACCTCCCTTTCCTCGCCACCCTCTCCCTCGCCGACAACCATTTCTATGGCCCCATCCCTTCCTCTCTCTCCTCACTCTCTTTCCTCAAATACCTTAATCTCTCTAATAACAACTTTAACTCCACTTTCTCTCCTCAGCTCTCGAAACTCCAAAATCTTCAAGTCCTCGATTTTTATAATAATAACATGAGTGGTCCTCTTCCTGTTTCGGTTGCTAATATGACAAATTTAAAGCACTTGCACCTCGGTGGTAACTTTTTCTCCGGTCAGATCCCGCCGGAGTATGGAAAATGGCGAAATATTGAATACCTTGCTGTATCCGGCAATGAGCTTACCGGAACTATCCCGCCGGAGATCGGAAACTTGAAGTCGTTGAAAGAGCTTTACATTGGGTATTATAATACTTATTCCGGTGGGATTCCGCCGGAAATTGGAAATTTGTCGGAGTTAGTGCGTTTTGACGCTGCTTATTGTGGGCTCTCTGGTGAGATTCCGGCGGAGATAGGGAAGCTGCAGAAACTTGATACTTTGTTTCTTCAAGTGAATGCGCTTTCTGGGTCTTTAACTTCTGAGCTTGGGAACTTGAAGAACTTGAAATCTATGGATTTGTCGAACAATGCACTTTCGGGCGAGGTTCCAGCGAGTTTCTCATTGCTAAAGAACTTAACTTTGCTGAATCTTTTTAGGAACAAGCTTCATGGGTCGATACCTGAGTTCATTGGTGAGCTTCCAAATTTGGAAGTGTTGCAACTTTGGGAGAATAACTTCACTGGGAGCATTCCAAAGAGTTTAGGGCAAAATGGGAAACTCACACTTGTTGATCTTTCTTCTAACAAGTTAAGTGGATCACTTCCTCCTGATTTGTGTTTTGGGCAAAAGCTTCAAACTTTGATTACTCTTGGGAATTTCCTCGTTGGCCCTATTCCTGATTCACTTGGAAAGTGTGAATCTTTGACTAGGATTCGTATGGGAGATAATTTTTTGAATGGTTCTATCCCTAAAGGGATTTTTGGTCTTCCAAAATTAACCCAAGTTGAGCTTCAGGATAATTTTCTATCAGGAAATTTTCCTGAGTCTGGTTCTATATCTCCAAATATTGGCCAAATTACTCTTTCTGGTAACCAGCTCTATGGACCTTTACCACCTACTATTGGTAACTTCACCAGTATGCAAAAGCTTCTTCTTGATGGTAATAAGTTTTCAGGTCCTATCCCTCCTGAGATTGGGAGGTTGCAACAGCTTTCAAAGATGGATTTTAGCCATAACAAGTTTTCTGGACCTATTGCTAAAGAAATCAGTCATTGTAAGTTGTTGACTTTTATTGATCTTAGCCGCAATGAGCTCTCTGGTGAGATCCCTAAGGAGATTAAGAATATGAGGATATTGAATTACTTCAACATTTCAAGAAACCATTTAGTTGGTACTATTCCTGGGTCTATTGCTGCCATGCAAAGTTTAACTTCTGTTGATTTTTCATATAATAATCTATCTGGTTTGGTTCCTGGTACTGGCCAATTCAGCTATTTTAACTACACCTCTTTCCTCGGCAACCCTGAACTTTGTGGCCCTTATTTGGCTCCTTGCAAAGAAGGGGGTGCCAATGGCTCTCAGCAACATCATGTTAAAGGACCATTGTCTCCTTCTTTGAAGTTATTGCTTGTTATTGGTTTGCTTGTGTGCTCCATTGTGTTTGCGGTTGTGGCAATACTCAAAGCTAGGTCGTTGAAGAAGGCTGGCACTCGTGCGTGGAAATTGACTGCATTCCAACGATTGGATTACACGGCTGATGATATTTTGGACTCCTTGAAGGATGACAACATTATAGGCAAAGGAGGTGCAGGTATTGTGTATAAGGGTGCAATGCCAAATGGGGATCTTGTTGCTGTGAAAAGGTTGCCAGCTATGAGCAGAGGCTCTTCCCATGACCATGGTTTTAATGCTGAGATTCAGACGTTGGGGCGAATTCGACACAGGCACATTGTTAGACTGTTGGGTTTCTGCTCAAACCATGAGACAAATCTTTTGGTCTATGAATACATGCCTAATGGAAGTTTAGGTGAAGTTCTTCATGGTAAGAAAGGAGGTCATTTGCTTTGGGACACAAGGTATAAAATTGCTGTTGAGGCTGCGAAGGGGCTTTGCTATCTACATCATGATTGTTCGCCGCTTATTGTGCATCGTGATGTGAAGTCGAACAATATACTTTTGGATTCCAACTTTGAAGCTCATGTTGCTGATTTTGGTCTTGCTAAGTTCCTTCAAGATTCTGGAACATCTGAATGCATGTCTGCTATTGCCGGTTCATATGGATACATAGCGCCAGAATATGCCTACACATTGAAAGTTGATGAGAAAAGTGATGTCTACAGCTTTGGGGTGGTTCTTTTAGAGCTTGTGACAGGAAGGAAACCGGTAGGAGAATTCGGTGATGGTGTGGACATTGTGCAATGGGTGAGAAAAATGACAGACTCAAACAAGGAAGTAGTTCTAAAAGTTCTTGATCCTAGACTTCCCTCATTTCCGAACGAAGAGGTTATGCATGTCTTCTATGTAGCCATGTTGTGTGTTGAAGAACAGGCAGTTGAGAGACCAACTATGCGCGAAGTTGTTCAAATCCTGACCGAGCTTCCGAAGCCGCCTGGCTCAAAACATGGCGACTTGACATTCACTGAATCTTCTTTGACATCATCAAACGGTTCGGAGTCTTCAACTCCAGCATTATCCAAGGAACCTAATGATCAAGAACATCCTCAGAAGTCATCATCACCTGATCTTCTTCTTAGCATTTGA 3048 0.4347 MQLLFFLLPFFLYLHHSTTAHTLSDYHSLLSFKTTSVTSDPTHFLSSWTPSTPYCTWPGITCDSSNRHVITLNLTSLSLSGTITTLHLPFLATLSLADNHFYGPIPSSLSSLSFLKYLNLSNNNFNSTFSPQLSKLQNLQVLDFYNNNMSGPLPVSVANMTNLKHLHLGGNFFSGQIPPEYGKWRNIEYLAVSGNELTGTIPPEIGNLKSLKELYIGYYNTYSGGIPPEIGNLSELVRFDAAYCGLSGEIPAEIGKLQKLDTLFLQVNALSGSLTSELGNLKNLKSMDLSNNALSGEVPASFSLLKNLTLLNLFRNKLHGSIPEFIGELPNLEVLQLWENNFTGSIPKSLGQNGKLTLVDLSSNKLSGSLPPDLCFGQKLQTLITLGNFLVGPIPDSLGKCESLTRIRMGDNFLNGSIPKGIFGLPKLTQVELQDNFLSGNFPESGSISPNIGQITLSGNQLYGPLPPTIGNFTSMQKLLLDGNKFSGPIPPEIGRLQQLSKMDFSHNKFSGPIAKEISHCKLLTFIDLSRNELSGEIPKEIKNMRILNYFNISRNHLVGTIPGSIAAMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPELCGPYLAPCKEGGANGSQQHHVKGPLSPSLKLLLVIGLLVCSIVFAVVAILKARSLKKAGTRAWKLTAFQRLDYTADDILDSLKDDNIIGKGGAGIVYKGAMPNGDLVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLLWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKEVVLKVLDPRLPSFPNEEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPGSKHGDLTFTESSLTSSNGSESSTPALSKEPNDQEHPQKSSSPDLLLSI* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0917 1015 SMART LRR_typ_2 329 353 IPR003591 -
Lan6g0917 1015 SMART LRR_typ_2 473 497 IPR003591 -
Lan6g0917 1015 SMART LRR_typ_2 569 592 IPR003591 -
Lan6g0917 1015 SMART LRR_typ_2 354 377 IPR003591 -
Lan6g0917 1015 SMART LRR_typ_2 160 184 IPR003591 -
Lan6g0917 1015 SMART LRR_typ_2 112 136 IPR003591 -
Lan6g0917 1015 SMART LRR_typ_2 281 304 IPR003591 -
Lan6g0917 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Lan6g0917 1015 MobiDBLite consensus disorder prediction 972 997 - -
Lan6g0917 1015 MobiDBLite consensus disorder prediction 962 1015 - -
Lan6g0917 1015 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Lan6g0917 1015 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 1000 - -
Lan6g0917 1015 SMART serkin_6 688 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0917 1015 Gene3D Transferase(Phosphotransferase) domain 1 766 971 - -
Lan6g0917 1015 SUPERFAMILY L domain-like 354 614 - -
Lan6g0917 1015 Pfam Leucine Rich Repeat 162 178 IPR001611 GO:0005515
Lan6g0917 1015 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 1000 - -
Lan6g0917 1015 SUPERFAMILY RNI-like 72 391 - -
Lan6g0917 1015 Gene3D Phosphorylase Kinase; domain 1 657 765 - -
Lan6g0917 1015 Pfam Protein tyrosine and serine/threonine kinase 691 959 IPR001245 GO:0004672|GO:0006468
Lan6g0917 1015 ProSiteProfiles Protein kinase domain profile. 688 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0917 1015 SUPERFAMILY Protein kinase-like (PK-like) 683 959 IPR011009 -
Lan6g0917 1015 Gene3D Ribonuclease Inhibitor 86 325 IPR032675 -
Lan6g0917 1015 Gene3D Ribonuclease Inhibitor 326 620 IPR032675 -
Lan6g0917 1015 Gene3D Ribonuclease Inhibitor 19 85 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0917 Lan-Chr6 8549378 8553434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0917 15 988 Receptor kinase-like Gene Family AT5G65700 78.310 0.0 1536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan6g0917 PK_Tyr_Ser-Thr 3.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0917 - - gmx:100499646 1595.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0954 18 14734306 14738173 Lan6g0917 6 8549378 8553434 PCT
Lan6g0917 6 8549378 8553434 Lan18g0954 18 14734306 14738173 PCT