LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan6g0916	ATGCAGCAACGCATTCTAAACCCATTCTTCTCATTACTACTATTACTATGCACAACTAGTAATATTTCATTAGGTTTATCTCATTCTCTCTACAAAGACACACAAATTCTACTACGTATTAAGAGCACCCAGTTGCAAGATAAAAACAACATTCTCAAAGATTGGGTTCCAAACACCAACAACCCATGTAACTGGACTGGTATTACCTGCGACGCACGAAAAATCTCTGTTGTTTCAATTAACTTATCACATTTTAATCTCTCTGGTGAGTTCCCTTGTGGTTTCTGTTACATTCACACTCTTAGAAAACTTTCACTTGGATATAACTATCTGGGTAAGACAATTAACACACACTCTTTTTCTATATGTTCTCACCTTCGTGTGTTAGACCTTACTGAAAACTTATTCATTGGTGAGTTACCGGAGTTTCGATCGGAGTTTAGCCAAATTAGAGTGCTGGATCTTTCATTTAACAACTTCTCCGGTGAAATTCCAGCGAGTTTTGGCCGGTTTCCTCAACTTAAGTCTCTGAGATTAGTCTCAAATCTATTTGGTGGAATAGTTCCTTCATTCTTAGGGAACCTTAGTGCCTTAAGAAATTTGGAAATTGGTTACAATCCCTTCAAGGAAGGTCCTTTACCTTGGCAACTTGGAAATCTTTCCAAACTTGAAACTTTGTTCATTAGCAATGCTAATCTTGTTGGGAGTATACCAGACTCAATAGGGAACCTTGTGTCACTCAAGAACATTGATTTGAGTTCCAACTATCTCTCTGGTGAAATCCCAAATAGCATTTTTGGTTTGAAATATTTGGAGCAAATTGAGCTTTTTGATAACAATCTTCAGGGTGAGTTACCAGAGAGTTTAGGAAACCTCACTAATTTGCTTCGTTTGGACCTTGGACAGAACAACCTCACAGGAAAACTTCCTCACACAATTGGTTCATTGAGTCTCATTTCTCTTCGGTTAAATGAAAATTTATTCTATGGAGAAATTCCATCAAGTTTGGCCTTAAACCCGAATTTACTACATCTTGCACTCTTTGCTAACAACTTCACAGGGAAACTACCACAGCATCTTGGCTTAAATTCTGACTTGGAAGATTTTGATGTGTCTAACAATCAATTAACAGGTGAATTGCCTAAGCATCTTTGTAAAAGGAAAAGGCTTCAGAGTATTTTATTATTCAATAACAAGTTTTCAGGAACACTGCCTTCACAATTTGGTGATTGTCATTCACTCACTGTTATCAGCATTGAAAACAACCAGCTTTCTGGTGATGTGCCATCAAAATTTTGGAACCACCCTAGCTTTGAGATTCTTAAAATGCAGCATAACATGTTTTCTGGTTCGATCTCTAATTCAATTTCCAACGCGAAGGGACTTTCCAAACTTCATTTGCAAGGTAACAATTTTTCAGGAATGTTACCAATTGGAATTTGTGAACTTCAGAGGCTAATGAAGTTTGACGTTAGCAAAAACTTGTTAACCGGTGAAGTTCCTGCTTGCATAACTAGATTGAAGAAGTTAGAATTTCTGAGGCTGCAAGAAAATATGTTCACAGGTCCAATTCCCTCTAATTTGAGTTTTTGGCATGTGTTGACAGAATTGAACTTGTCCTATAACCAATTCTCTGGCACAATTCCATCACAACTTAGTTATTTGCGGGATTTAACATACCTTGATCTCTCTATGAACTCACTCACCGGGAATGTTCCACCAGAATTGGTCAATCTCGGACTCAGTGAATTCAATGTATCTGGCAATAAACTGTATGGAGAGGTGCCTTATGTTTTCAGAAACCCTGTTTTCTTGTCTGGTCTAATGGGAAATCCTGGTCTATGCAGCTCAGTATTAAAGGAATTTCCTCCTTGTTCAAAACAAAAACCCTTTTCTCTGATTGCTGTTATCATTTTTGCAGCTTGTTTTTTACTCTTCATGGGGTTTGTTCTGTTGTTTTTGAAGAGAAAGTTTCTCTTTTTTAATGGTAAGTCCTATGAGCGTTCTTACAAGACAACTACTTTTCAAATAGTTGGGTTTAGTGAAGAAGACATTGTTCCATTCTTAACAAGCGAGAACCTCATTGGCAGTGGGAGTTCAGGACAAGTGTATAAGGTGGATCTAAATAATGGGGAATTCGTTGCGGCAAAAAAACTATGGGGAGGAACACGAAAACTTGAAACAGAATCAGTGTTCAAGTCTGAGATTGAGATCTTGGGTAGAATTAGGCATGCTAATATTGTGAAACTTCTGTTTAGTTGCAGTGCTGATGATGACTTAATGGTTTTGGTGTATGAGTACATGGAGAATGGTAGCTTAGGTGATGTTTTGCATGTTAACAAATGTGAGGAATTGAGGGAATGGTCCACAAGGTTCAACATTGCTGTTGGTGCAGCTCAAGGGTTGGCTTATTTGCATCATGCTTGTGTTCCCCCTATACTTCACAGAGATATCAAGAGTAATAACATATTGCTGGACCGAGATTTTTTGCCTCGTGTCGCAGATTTTGGGCTGGCTAAGACCCTGCAGCATGAAGAAGGTGGCATTGGTGATATGTCCAGAATTGCGGGATCATATGGTTACATTGCTCCAGAGTATGGTTACACACTTAAAGTGACTGAGAAGGGTGATGTCTATAGTTTTGGTGTGGTGCTGATGGAATTGATTACAGGGAAGAGGCCTAATGACCCTTCTCTTGGTGACAACATGGATATAGTGAAGTGGGTTACTGAGACAGCTTTTTCATCTGCTGAGGATCAACCAATTGATTTGGCTCATATTATAGACCCAATGCTGAACCTGGCTACTTGTGATTATGAAGAGATTGAGAGTGTTCTAAATGTAGCTCTACTTTGCACCACACCCTTTCCCATGAATAGACCTACAATGAAAAGGGTGGTTGAATTGTTGAAGGAACTGAAACTGGCTCGTCACAACTAA	2940	0.3871	MQQRILNPFFSLLLLLCTTSNISLGLSHSLYKDTQILLRIKSTQLQDKNNILKDWVPNTNNPCNWTGITCDARKISVVSINLSHFNLSGEFPCGFCYIHTLRKLSLGYNYLGKTINTHSFSICSHLRVLDLTENLFIGELPEFRSEFSQIRVLDLSFNNFSGEIPASFGRFPQLKSLRLVSNLFGGIVPSFLGNLSALRNLEIGYNPFKEGPLPWQLGNLSKLETLFISNANLVGSIPDSIGNLVSLKNIDLSSNYLSGEIPNSIFGLKYLEQIELFDNNLQGELPESLGNLTNLLRLDLGQNNLTGKLPHTIGSLSLISLRLNENLFYGEIPSSLALNPNLLHLALFANNFTGKLPQHLGLNSDLEDFDVSNNQLTGELPKHLCKRKRLQSILLFNNKFSGTLPSQFGDCHSLTVISIENNQLSGDVPSKFWNHPSFEILKMQHNMFSGSISNSISNAKGLSKLHLQGNNFSGMLPIGICELQRLMKFDVSKNLLTGEVPACITRLKKLEFLRLQENMFTGPIPSNLSFWHVLTELNLSYNQFSGTIPSQLSYLRDLTYLDLSMNSLTGNVPPELVNLGLSEFNVSGNKLYGEVPYVFRNPVFLSGLMGNPGLCSSVLKEFPPCSKQKPFSLIAVIIFAACFLLFMGFVLLFLKRKFLFFNGKSYERSYKTTTFQIVGFSEEDIVPFLTSENLIGSGSSGQVYKVDLNNGEFVAAKKLWGGTRKLETESVFKSEIEILGRIRHANIVKLLFSCSADDDLMVLVYEYMENGSLGDVLHVNKCEELREWSTRFNIAVGAAQGLAYLHHACVPPILHRDIKSNNILLDRDFLPRVADFGLAKTLQHEEGGIGDMSRIAGSYGYIAPEYGYTLKVTEKGDVYSFGVVLMELITGKRPNDPSLGDNMDIVKWVTETAFSSAEDQPIDLAHIIDPMLNLATCDYEEIESVLNVALLCTTPFPMNRPTMKRVVELLKELKLARHN*	980

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan6g0916	979	SMART	serkin_6	689	976	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan6g0916	979	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED	12	974	-	-
	Lan6g0916	979	SUPERFAMILY	RNI-like	104	576	-	-
	Lan6g0916	979	ProSiteProfiles	Protein kinase domain profile.	689	979	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan6g0916	979	SUPERFAMILY	L domain-like	325	429	-	-
	Lan6g0916	979	Gene3D	Ribonuclease Inhibitor	187	258	IPR032675	-
	Lan6g0916	979	Gene3D	Ribonuclease Inhibitor	259	317	IPR032675	-
	Lan6g0916	979	SUPERFAMILY	Protein kinase-like (PK-like)	688	970	IPR011009	-
	Lan6g0916	979	Gene3D	Phosphorylase Kinase; domain 1	679	767	-	-
	Lan6g0916	979	Pfam	Leucine rich repeat N-terminal domain	32	71	IPR013210	-
	Lan6g0916	979	Pfam	Leucine rich repeat	222	281	IPR001611	GO:0005515
	Lan6g0916	979	Pfam	Leucine Rich Repeat	150	169	IPR001611	GO:0005515
	Lan6g0916	979	Gene3D	Ribonuclease Inhibitor	318	627	IPR032675	-
	Lan6g0916	979	Gene3D	Ribonuclease Inhibitor	30	186	IPR032675	-
	Lan6g0916	979	PANTHER	LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2	12	974	-	-
	Lan6g0916	979	ProSitePatterns	Protein kinases ATP-binding region signature.	695	718	IPR017441	GO:0005524
	Lan6g0916	979	Pfam	Protein kinase domain	691	966	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan6g0916	979	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	813	825	IPR008271	GO:0004672\|GO:0006468
	Lan6g0916	979	Gene3D	Transferase(Phosphotransferase) domain 1	768	979	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan6g0916	Lan-Chr6	8533475	8536876	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan6g0916	33	974	Receptor kinase-like Gene Family	AT5G65710	53.044	0.0	973

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XI-1	Lan6g0916		Pkinase	2e-44	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan6g0916	-		-	gmx:100813889	1155.97