Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0906 ATGGAAGATAGAAATTATGCTGAGAAAGTTGATGAAGTTATGCTGCCAGGGTTCAGGTTTCATCCAACTGATGAGGAGCTTGTTGGGTTTTACCTGAAGAGAAAGATTCAGCAATGGCCTATGTCTATTGAGCTAATTAAACAACTTGATATCTATAAATATGATCCTTGGGATCTTCCAAAGTTGGCCTCAACTGGGGAGAAAGAGTGGTATTTCTATTGTCCTAGAGACAGAAAATACAGGAACAGTGCAAGGCCTAATAGGGTAACAGGAGCTGGGTTCTGGAAAGCTACAGGAACTGACCGACCTATTTATTCCTCAGAGGGTTCTAAGTGTATTGGCCTCAAGAAATCTCTAGTCTTCTACAAAGGTAGAGCTGCCAAAGGGGTCAAAACTGATTGGATGATGCATGAGTTCAGATTACCTTCTCTTACAGACTCATCACCATCTCCAAAGAAATACATAGAGAAGACCATTCCCACAAATGACTCCTGGGCAATATGCAGAATATTCAAGAAAACCAATGCTACAGCTCAAAGAGCTCTCTCTCACTCTTGGGTCTCTCCCTTACCTGAAACAAGAACCTCTGATATGCTAACTAATGATCGAAACAGTGCCCATTTTTGTTCATCAAACATGCCACTGACAAAGCAAACTGGCTTAGCCAGCCAGTTTTGTAACATTAACCACAATGACACACATCACTTAACCACTAGTATTAGCACTCTTTGTCCTTTAGATCTTGCTTCTTATAACAAATCCATCATCAATCCATTGCTGTACAAGCCCTTTGATCAGTTACCCAATTTAAATGGACACATTAGCACAGGATTAATGTTTTCAACTCCTCTTGAAACATCCACAACTAGTGCCAAATCTACGGTTGATGTTTCTTCCTTGCTGTTGAATATGTCATCTTCTGTGCTAGGAGATTTTAGTAAAACCTGTGAGGGAACAATTACAAACTTTGGTGTGCTGCAAGAGCACAATAATGGTTACTCAATACCATTACAACGTGAAATGCAAGGGACCATTGGCAACCAATACGACAGCGTATTGGTGAAGATTCCTAATATAAATGTGCCTTGTGTTGATGAACAAGAGTTGGAGAAAGCACGATCCATTGGGTTTCCATTGAGTATGCCTAATTTCAACATTGGAGATGCATGGAAGTCAAATCTGCTTTGGGATTCTTCCTCTTGTGATTATGTGTCATCTAGTTATTCCACTACTAAGTGTTATACTTAG 1248 0.4006 MEDRNYAEKVDEVMLPGFRFHPTDEELVGFYLKRKIQQWPMSIELIKQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLTDSSPSPKKYIEKTIPTNDSWAICRIFKKTNATAQRALSHSWVSPLPETRTSDMLTNDRNSAHFCSSNMPLTKQTGLASQFCNINHNDTHHLTTSISTLCPLDLASYNKSIINPLLYKPFDQLPNLNGHISTGLMFSTPLETSTTSAKSTVDVSSLLLNMSSSVLGDFSKTCEGTITNFGVLQEHNNGYSIPLQREMQGTIGNQYDSVLVKIPNINVPCVDEQELEKARSIGFPLSMPNFNIGDAWKSNLLWDSSSCDYVSSSYSTTKCYT* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0906 415 ProSiteProfiles NAC domain profile. 14 173 IPR003441 GO:0003677|GO:0006355
Lan6g0906 415 Gene3D NAC domain 23 178 IPR036093 GO:0003677|GO:0006355
Lan6g0906 415 SUPERFAMILY NAC domain 12 173 IPR036093 GO:0003677|GO:0006355
Lan6g0906 415 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 413 - -
Lan6g0906 415 PANTHER PROTEIN FEZ ISOFORM X1 1 413 - -
Lan6g0906 415 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0906 Lan-Chr6 8441799 8444353 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0906 1 313 NAC Transcription Factor Family AT1G26870 58.716 3.12e-115 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan6g0906 NAM 3.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0906 - - vun:114179488 589.726