Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0902 ATGGATCTGCAAAATGTGCAAAACCAAAGCTTGCGTTTGGTTCTATCTACTGATGCCAAGCCTAGGCTAAAATGGACTCCTGAACTTCACCAAAGATTCATTGAGGCAATTAATCAACTTGGAGGTGCAGAAAAGGCTACCCCAAAGAGTATTATGAGGGTGATGGGGATTCAAGGACTAACATTGTACCACCTGAAGAGTCATTTACAGAAATATAGACTTGGGAAAAGCCCACATATGGAAACCTGTTCTGACAACAAACAAGATCATATACAAATCCAGAGCAGAGATGATCATTGCAAAAGAGAAATCAGTATTGGATCCCAGAATCAAACAACTGAAAGTTTGCATATTGTTCAGGCTCTCCAAATGCAAATGGAAGTACAAAGTAAACTTTGTGAACAAATTGAGGTACAGAAACATATGCAGCTTAGAATTGAAGCTCAAGGGAAGTATTTACAATCAGTGCTAAAGAAAGCACAAGAAGCATTAACAGGACACAATTCTTCCACAGTGGATGTAGAAGTTGCAAAAGCTGAACTTTCTCACTTAGTGTCAATAATGAACAAGGGCTGCCCAAGCTCTCCAATTTCAGAACTGACAGAAATAAGAGGGTTTAGTTTAAACTGTGGGAAGAGGAAACAAAATGGAGGAACTATGTGTTCCCTGGAAAGCTCTTTGACATCTTCCGAAAGCGAAGAAGAAGAAGAAGAAAAGAAGCCTCAAAAGTCTAATACGCATTCAGTTGAATTGTCACTAATGGCCTTTCATACAGAAGATGATAAGGGATCCAAGGTAGATAATGGAGCTTGTGGGAGAAAGAGAAGTACAGCAATTGATTCTGATGGTAGCTGTGTTGATCAACCTTCTGAGAAAAGATGTTGCAACAAGTTGAGGAAATTAGAAATGTTAGAAATGATTGACTTGAATAGCCAATATCAGAAGGACATTGACACTAGTTCAAAAGAAATAGATTTAAATTGCAGTTCAAGCTTTTGGGGACAGTGA 1008 0.3859 MDLQNVQNQSLRLVLSTDAKPRLKWTPELHQRFIEAINQLGGAEKATPKSIMRVMGIQGLTLYHLKSHLQKYRLGKSPHMETCSDNKQDHIQIQSRDDHCKREISIGSQNQTTESLHIVQALQMQMEVQSKLCEQIEVQKHMQLRIEAQGKYLQSVLKKAQEALTGHNSSTVDVEVAKAELSHLVSIMNKGCPSSPISELTEIRGFSLNCGKRKQNGGTMCSLESSLTSSESEEEEEEKKPQKSNTHSVELSLMAFHTEDDKGSKVDNGACGRKRSTAIDSDGSCVDQPSEKRCCNKLRKLEMLEMIDLNSQYQKDIDTSSKEIDLNCSSSFWGQ* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0902 335 MobiDBLite consensus disorder prediction 218 248 - -
Lan6g0902 335 Pfam Myb-like DNA-binding domain 22 73 IPR001005 -
Lan6g0902 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 77 IPR017930 -
Lan6g0902 335 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 332 IPR044848 GO:0003700
Lan6g0902 335 Gene3D - 19 77 - -
Lan6g0902 335 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 332 - -
Lan6g0902 335 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Lan6g0902 335 Pfam MYB-CC type transfactor, LHEQLE motif 117 162 IPR025756 -
Lan6g0902 335 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0902 Lan-Chr6 8414254 8416204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0902 11 294 G2-like Transcription Factor Family AT1G69580 49.000 6.09e-75 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan6g0902 Myb_DNA-binding 8.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0902 - - lang:109340795 427.557