Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0900 ATGAAAGCAAGTGTTCTATACTCTTCACAACAACAAAACACAAACTCGTCTTCATATTCTTCTTCTTCTCTTTCTCCTTCAATGGGAATGGTCTATGCAGACATGGGTGCTCTCTCTCTTTGCCCCAATTATGGTGCTGCTGTTTCTACATCTCAAGATTGTTTTGCCCCTAATGGGGGTTCAAGCTGGGGTTTTCCATTCACGAGGGAATGCCATATTGCAAGAAACTTTGAGGAGCACCCCAACAACAGTGATATTGTTATGGAGGGTAAAGGGTCTGATTGCAGTGATGGGGTTGGGGAAAACAGTGAGCAAACTCACCAAAATGCTTACACTAATGAAAAGAACCCTAATGAGAATCATGTCAGTGGGAAAGAGGTAGATACTACTGGGCAATCAAAACTCTGTGCAAGAGGGCATTGGAGGCCTGCAGAAGATTCCAAGCTCAAAGAACTTGTTGCTCTTTACGGGCCCCAGAACTGGAACCTCATAGCTGAAAAGTTAGAAGGAAGATCAGGTAAGAGTTGTAGGCTGAGGTGGTTCAACCAGTTAGACCCAAGGATCAATAGGAGAGCTTTCAGTGAAGAAGAGGAAGAGAGACTAATGCAGGCACACAGGATATATGGTAACAAATGGGCCATGATCGCAAGGCTTTTCCCTGGGAGAACAGATAATTCTGTTAAGAATCACTGGCATGTTATAATGGCTAGGAAGTATAGAGAACAATCCAGTGCTTATAGGAGGAGGAGGCTGAGTCAATCTTTTTACAGAAGAATGGAGGAAGATACTACAACTTTTGTCTCTAAAGACACAACATCAAGTGGAATAGAACCACCACCTTATTGTCTCAATCTCCCAAATAACTTGTCTACTTTCCCATACGCATCATCTTTTCATCGATCTGGTAGAAGTGGGGTTGAGTATGGATTGAATGGCTCACATCACATGACTGGTGGGAGAGAAGCAATAATTTCAAGCAGCAAAAAGGTCCCTCCCACTCATTTTGGCTTAAATGCTCAACAAACACCATCTGAACTATTCTCAGGTGCTAGAAGCAATGAGATGGTGAGTGAGTATTTTAACCAAACCAGATACTTGGACAACAAACCAAATGATGCACCACCTCCTCAACTTCAATCATCGGGTTACTACCCTTATTACAACACATACCTGATGCCAATGCAACAACATCAAAATTACAATAATATTTACAGTTTCTCATCAAATTCCACAGCCTCAGTCATGTTGACCAGTGAAGAACTTTCATTATCATCTGTGGCAGAACAACATAGAGACAATGAAGTAGTACTAAGCAGTGACCCACCTGTAGATGCAATTCCTACACCTACATTTATTGACTTCCTTGGGGTTGGAGCCACAACAACATGA 1389 0.4219 MKASVLYSSQQQNTNSSSYSSSSLSPSMGMVYADMGALSLCPNYGAAVSTSQDCFAPNGGSSWGFPFTRECHIARNFEEHPNNSDIVMEGKGSDCSDGVGENSEQTHQNAYTNEKNPNENHVSGKEVDTTGQSKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNSVKNHWHVIMARKYREQSSAYRRRRLSQSFYRRMEEDTTTFVSKDTTSSGIEPPPYCLNLPNNLSTFPYASSFHRSGRSGVEYGLNGSHHMTGGREAIISSSKKVPPTHFGLNAQQTPSELFSGARSNEMVSEYFNQTRYLDNKPNDAPPPQLQSSGYYPYYNTYLMPMQQHQNYNNIYSFSSNSTASVMLTSEELSLSSVAEQHRDNEVVLSSDPPVDAIPTPTFIDFLGVGATTT* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0900 462 MobiDBLite consensus disorder prediction 91 126 - -
Lan6g0900 462 Gene3D - 138 189 - -
Lan6g0900 462 ProSiteProfiles Myb-like domain profile. 138 184 IPR001005 -
Lan6g0900 462 Pfam Myb-like DNA-binding domain 138 184 IPR001005 -
Lan6g0900 462 Pfam Myb-like DNA-binding domain 190 233 IPR001005 -
Lan6g0900 462 Gene3D - 192 261 - -
Lan6g0900 462 MobiDBLite consensus disorder prediction 1 23 - -
Lan6g0900 462 PANTHER MYB TRANSCRIPTION FACTOR 28 460 - -
Lan6g0900 462 SUPERFAMILY Homeodomain-like 138 231 IPR009057 -
Lan6g0900 462 SMART sant 189 237 IPR001005 -
Lan6g0900 462 SMART sant 137 186 IPR001005 -
Lan6g0900 462 ProSiteProfiles Myb-like domain profile. 185 235 IPR001005 -
Lan6g0900 462 MobiDBLite consensus disorder prediction 98 126 - -
Lan6g0900 462 CDD SANT 141 182 IPR001005 -
Lan6g0900 462 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 138 184 IPR017930 -
Lan6g0900 462 CDD SANT 192 232 IPR001005 -
Lan6g0900 462 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 185 239 IPR017930 -
Lan6g0900 462 PANTHER MYB PROTEIN-RELATED 28 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0900 Lan-Chr6 8401745 8404025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0900 28 250 MYB Transcription Factor Family AT1G69560 55.319 6.78e-78 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan6g0900 Myb_DNA-binding 2.1e-14 CL0123