Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0899 ATGGAAGGCTGCAGAACAAGCTCTGAACTCCCACCTGGCTTTAGGTTTCATCCTACTGATGAGGAACTCATCGTGTATTACCTTTGTAACCAAGCCACGTCGAAGCCATGCCCTGCATCCATCATCCCAGAAGTGGATATCTATAAATTTGATCCATGGGAATTGCCAAGTAAAACAGATTTTGGAGAAAATGAATGGTACTTCTTTAGCCCAAGAGAAAGGAAGTACCCAAATGGGGTGAGGCCTAACCGAGCAACTGTGTCTGGGTATTGGAAGGCCACTGGTACAGACAGGGCAATCCATAGTGGGTCTAAGCATATAGGGTTGAGGAAATCTTTGGTCTTTTACAAGGGTAAGCCACCAAAGGGCATAAAGACTGATTGGATTATGCATGAGTATCGACTAGTCGAATCAAAAAGAGAAGCTAGTAGGCAACTTGGGTCCATGAGACTAGATGACTGGGTCTTATATAGGATCTATAAGAAGAAGCACATGGCAAAAGCATTTGAGCCAAAAGAGGAATACCCCTCTGTCCAAATTAATCTTTCAGCACCAAACAATGAGGGTGAACAAGATATGTTGAAGTTACCAAGGACTTGTTCCCTTACTTATCTTTTGGATATGAATTACTTGGGTCCAATATTATCTGATGGTTCCTACAACCCAATCTTTGATTTTCAACTTAACTCTGCCAATATTGGAACAGACCCATTTGTAAAACCTGAGCTGGTTGAAATGGCTAACAATTATGCATCAAGTTCAGGGATGTACCAAGTGAAGCAGAGTAACACTATGAACCAGCCTATGTTTTTGAAGCAAGTGCATGATCTGCAAGGATATCACCAATAA 849 0.4181 MEGCRTSSELPPGFRFHPTDEELIVYYLCNQATSKPCPASIIPEVDIYKFDPWELPSKTDFGENEWYFFSPRERKYPNGVRPNRATVSGYWKATGTDRAIHSGSKHIGLRKSLVFYKGKPPKGIKTDWIMHEYRLVESKREASRQLGSMRLDDWVLYRIYKKKHMAKAFEPKEEYPSVQINLSAPNNEGEQDMLKLPRTCSLTYLLDMNYLGPILSDGSYNPIFDFQLNSANIGTDPFVKPELVEMANNYASSSGMYQVKQSNTMNQPMFLKQVHDLQGYHQ* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0899 282 SUPERFAMILY NAC domain 7 162 IPR036093 GO:0003677|GO:0006355
Lan6g0899 282 PANTHER NAC DOMAIN-CONTAINING PROTEIN 1 6 236 - -
Lan6g0899 282 PANTHER NAC TRANSCRIPTION FACTOR 56 6 236 - -
Lan6g0899 282 ProSiteProfiles NAC domain profile. 10 162 IPR003441 GO:0003677|GO:0006355
Lan6g0899 282 Pfam No apical meristem (NAM) protein 11 135 IPR003441 GO:0003677|GO:0006355
Lan6g0899 282 Gene3D NAC domain 19 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0899 Lan-Chr6 8387618 8389604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0899 6 214 NAC Transcription Factor Family AT1G69490 66.516 1.20e-108 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan6g0899 NAM 4.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0899 - - gmx:100785110 455.292