Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0896 ATGGCTACTATATATTCTGCATGTTCAGGCACTGCTTTTCTCTCCCCTACTATTTTTCACAACAAGGGTTTCTCCTTCAAAGCCAAAGTGCCACCACTTCATCTCAAAAAGCCTATCCATGCTAAGTCTCTTACTTCTTTTGAAACTGATATATCACTACCACCAGCAGTTCAAACCTTCTGGCAATGGCTTCAAAAAGAAGGTGTTGTCTCAAACAAGACACCAGTGAAGCCAAGTGTGGTGCCAGAAGGCCTAGGACTTGTTGCAGTTAAAGATGTTTCTAGGAATGAGGTTGTGTTACAAGTACCTAAGAGGCTGTGGATAAATCCAGATGCAGTGGCAGCTTCAGAGATTGGGAGTTTGTGTAGTGGTTTGAAGCCATGGTTGTCTGTTGCACTGTTTTTGATAAGAGAGAGGTCAAGGGATGATTCTGTTTGGAAACACTATTTTGGTGTTCTGCCACAGGAAACTGATTCAACTATATATTGGTCAGAGGAGGAGCTTTTAGAGCTTCAAGGTACTCAACTTCTGAACACAACATTGAGTGTTAAAGAATATTTGAAGAATGAATTTCTAAGACTGGAAAACGAAATCATACTCTCTAACAAGAAGCTTTTCCCTACTCCTATAACATTGGATGACTTCTCCTGGGCATTTGGAATTCTCAGATCAAGGGCATTTTCTCGCCTTAGAAATGAAAATCTAGTCATAATTCCACTTGCAGACTTCATAAACCACAGTGCCAGAGTAACTACAGAAGATCATGCTTATGAAATTAAAGGAGCAGCAGGCCTTTTCTCCCGGGATTACCTTTTTTCCCTTAGAAGCCCCCTTTCTCTCAAGGCTGGGGACCAGGTATATATCCAATATGATTTAAATAAAAGCAATGCCGAGTTGGCTCTGGACTACGGTTTTATCGAACCAAATGCAGATCGGAGTGCATATACCCTGACACTACAGATATCTGAATCAGACCCCTTTTTTGATGACAAACTAGACATTGCTGAATCCAATGGTTTTGGCGAGACTGCTTACTTTGACATCTTTTTCAACCGCCCGCTTCCACCAGGGTTGCTTACATATCTGAGACTTGTAGCTGTAGGAGGCACTGATGCTTTCCTATTGGAATCACTATTCAGAAACTCCATCTGGGGTCATCTTGAATTGCCTGTGAGCCGTGATAATGAGGAGCTAATATGCCGAGTGGTTCGAGAAGCCTGCAAATCTGCTCTTTCCGGTTATCATACAACCATTGAAGAGGATAACAAGTTGAAAGAAACAAATCTAGATTCAAGGCTTGCAATAGCAGTTGGAGTGAGAGAAGGAGAGAAGAAGGTCCTGCAGCAAATTGATGAGATCTTCAAGGAGAAAGAATTGGAATTGGACCAGTTAGCATATTATCAAGAAAGGAGACTGAAGGATCTTGGACTCTGCGGAGAAGCTGGTGAAATTATTGGAGGGGACCTTGAAAAGTTCTTTTAA 1482 0.4177 MATIYSACSGTAFLSPTIFHNKGFSFKAKVPPLHLKKPIHAKSLTSFETDISLPPAVQTFWQWLQKEGVVSNKTPVKPSVVPEGLGLVAVKDVSRNEVVLQVPKRLWINPDAVAASEIGSLCSGLKPWLSVALFLIRERSRDDSVWKHYFGVLPQETDSTIYWSEEELLELQGTQLLNTTLSVKEYLKNEFLRLENEIILSNKKLFPTPITLDDFSWAFGILRSRAFSRLRNENLVIIPLADFINHSARVTTEDHAYEIKGAAGLFSRDYLFSLRSPLSLKAGDQVYIQYDLNKSNAELALDYGFIEPNADRSAYTLTLQISESDPFFDDKLDIAESNGFGETAYFDIFFNRPLPPGLLTYLRLVAVGGTDAFLLESLFRNSIWGHLELPVSRDNEELICRVVREACKSALSGYHTTIEEDNKLKETNLDSRLAIAVGVREGEKKVLQQIDEIFKEKELELDQLAYYQERRLKDLGLCGEAGEIIGGDLEKFF* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0896 493 Pfam Rubisco LSMT substrate-binding 323 447 IPR015353 -
Lan6g0896 493 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 314 485 IPR036464 -
Lan6g0896 493 ProSiteProfiles SET domain profile. 67 291 IPR001214 GO:0005515
Lan6g0896 493 Gene3D - 307 471 IPR036464 -
Lan6g0896 493 SUPERFAMILY SET domain 54 309 IPR046341 -
Lan6g0896 493 Gene3D set domain protein methyltransferase, domain 1 54 306 - -
Lan6g0896 493 PANTHER [FRUCTOSE-BISPHOSPHATE ALDOLASE]-LYSINE N-METHYLTRANSFERASE, CHLOROPLASTIC 37 483 - -
Lan6g0896 493 Pfam SET domain 84 290 IPR001214 GO:0005515
Lan6g0896 493 PIRSF RMT_SET 1 491 IPR011192 GO:0009507|GO:0030785
Lan6g0896 493 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 37 483 - -
Lan6g0896 493 CDD SET_RBCMT 66 306 IPR044431 GO:0016279|GO:0018022
Lan6g0896 493 ProSiteProfiles Plant LSMT protein-lysine methyltransferase family profile. 1 490 IPR011192 GO:0009507|GO:0030785
Lan6g0896 493 SMART set_7 72 297 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan6g0896 SET 1.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0896 K00592 - gmx:100818113 803.127