Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0889 ATGGTAGGTGGAGATGGGAAGAAGCAACCACCTTCAACGGCGGCGGAGGGTAGTCCACCACGGCGACCCACCATAACTCTCCCTCCACGCACTTCCATGGACACCCTTTTCAATGGTGGTGGTGGTGATGGGGGAGCCTTTGTCTTCAGCCCTGGTCCAATGACTCTTGTTTCAAGCTTCTTTGGTGAGAACAACAACGATGAGTATAAGTCTTTTTCTCAGCTCCTCGCCGGTGCCATGTCTCCACTGGATCACAAAGGATTTTCCGGTGAAGGTGGTGGTGATGGTGATGGTGATGGTGATGGTGATGGTGCCTTCAAGCATAGTAATAATAATAATAATAACACACAGTTATCATCACCCTTTTTCATGATTCCACATGAGTTCAGCTCTTCTGGCTTGCTTGATTCACCTACCTTCTTGTTTTCACCTCCTCAGGGGAACTTTGGATTGACACACCAGCAAGCTTTAGCACAGGTCACAGCTCAGGCTGTGCAGGCCCACTCAAATGTGCAAATCCAAACTGAACATTCATCCTCTGCATCATTAGTAACTGCAGCTACTTCCACTACTACACAACAGTTGATGTCACGGTCAGTGCCGGACACTAGAGCAGCAAAGACTGAATCCCTTGATTATTCTCAATCTGAACAAAGATTGCAGTCTTCTGTGAATGGCGATAAGCCTAATGACGACGGCTACAACTGGCGGAAGTATGGGCAGAAACAGGTAAAAGGTAGTGAGTTTCCTCGAAGTTATTATAAGTGTACGCATCCAAACTGTCGTGTCACGAAAAAGGTTGAGCGCTCTCTTGAAGGTCATGTGACTGCAATTATTTATAAAGGAGAGCACAATCATCAATGTCCTCATCCCGACAAGCTCGCAAAAGATACTTTATCTTCAAATCAAAATTCTGATATGCAAGGGAGTTATGATTCAAGTTATCAATTCGAAAGTGGAGGTTTAAATAGATTGAAGGAAGGGATAAGTCACTCAATGTCTAAGATGGATCAAGAGTCTAGTCAGGCAATAGCTGAACATGTATCGGGAACAAGTGACAGCGAGGAAGTTGGTGATCATGAAACTGAAGTAGATGATAAAAATGATGAGCCTGATCCCAAGAGGAGAAACACGGAACTTAGCTTACCAGATCCAGCCTCTTCACACAGGGCTGTCACAGAGCCTAGAATCATTGTGCAAACAACAAGTGAAGTAGATCTCTTAGATGATGGGTATAGATGGCGAAAATATGGGCAAAAGGTTGTCAAAGGCAACCCTTATCCAAGGAGCTATTACAAATGCACAACCCCAGGCTGTGGTGTTCGGAAGCATGTCGAGAGGGCGTCAACGGATCCTAAAGCTGTCATAACAACATATGAAGGAAAACATAATCATGATGTGCCAGCAGCTAAGATTAACAGCCACACCATGGCCAACAGTAGTGCATCACAGCTAAAACCACCAAATGCCAAACCCGAGACGAATAGTTTCAGCAGCAGAGGAGTTGGTGCCAATCAACAGCAGCCCGTGGCACGTCTAAGGCTGAAGGAAGAGCGGATAACATAG 1566 0.4553 MVGGDGKKQPPSTAAEGSPPRRPTITLPPRTSMDTLFNGGGGDGGAFVFSPGPMTLVSSFFGENNNDEYKSFSQLLAGAMSPLDHKGFSGEGGGDGDGDGDGDGAFKHSNNNNNNTQLSSPFFMIPHEFSSSGLLDSPTFLFSPPQGNFGLTHQQALAQVTAQAVQAHSNVQIQTEHSSSASLVTAATSTTTQQLMSRSVPDTRAAKTESLDYSQSEQRLQSSVNGDKPNDDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCRVTKKVERSLEGHVTAIIYKGEHNHQCPHPDKLAKDTLSSNQNSDMQGSYDSSYQFESGGLNRLKEGISHSMSKMDQESSQAIAEHVSGTSDSEEVGDHETEVDDKNDEPDPKRRNTELSLPDPASSHRAVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCGVRKHVERASTDPKAVITTYEGKHNHDVPAAKINSHTMANSSASQLKPPNAKPETNSFSSRGVGANQQQPVARLRLKEERIT* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0889 521 MobiDBLite consensus disorder prediction 176 236 - -
Lan6g0889 521 MobiDBLite consensus disorder prediction 176 229 - -
Lan6g0889 521 SUPERFAMILY WRKY DNA-binding domain 400 468 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan6g0889 521 MobiDBLite consensus disorder prediction 83 113 - -
Lan6g0889 521 MobiDBLite consensus disorder prediction 296 318 - -
Lan6g0889 521 MobiDBLite consensus disorder prediction 476 506 - -
Lan6g0889 521 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 18 520 IPR044810 GO:0003700
Lan6g0889 521 SMART WRKY_cls 230 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g0889 521 SMART WRKY_cls 408 467 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g0889 521 MobiDBLite consensus disorder prediction 476 521 - -
Lan6g0889 521 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 18 520 - -
Lan6g0889 521 Pfam WRKY DNA -binding domain 231 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g0889 521 Pfam WRKY DNA -binding domain 409 465 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g0889 521 MobiDBLite consensus disorder prediction 1 41 - -
Lan6g0889 521 ProSiteProfiles WRKY domain profile. 225 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g0889 521 MobiDBLite consensus disorder prediction 331 394 - -
Lan6g0889 521 MobiDBLite consensus disorder prediction 283 318 - -
Lan6g0889 521 Gene3D WRKY domain 393 469 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan6g0889 521 Gene3D WRKY domain 215 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan6g0889 521 SUPERFAMILY WRKY DNA-binding domain 228 289 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan6g0889 521 MobiDBLite consensus disorder prediction 334 349 - -
Lan6g0889 521 ProSiteProfiles WRKY domain profile. 403 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0889 Lan-Chr6 8302727 8305639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0889 22 521 WRKY Transcription Factor Family AT2G03340 53.659 2.66e-159 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan6g0889 WRKY 2.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0889 - - lang:109349541 996.882