Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0864 ATGTTAGGTGGACTATTTGTTGGAGACTCATGGGATAGAAAACTCAAGCGAAAAATTGAGGAGTTATGTACCATGGATAAAGATTCAGAAGAATTGTCACTCTCTTTGAGTCTTGGAAGCAACAACATGGTGCATGAATCATCCAAGAGGAAGGTCGAAGAGAGTTCACATTTTGATCTAAAACTTGTCGAAAACTCCAACAATAAGGAATTGATCAAAGCGAATGAGCAACAATTCTCTTGTAAGTTTTGCTGCAAGAAATTTCCCAACTCCCAAGCTTTGGGAGGACACCAAAACGCTCATAAGCGTGAAAGGAACCTCTTCAAGATGAACAGAGAACTTTCTATGGGTACTTTTGAAGCTGGTTTTGACCCATATCCTTATCCATCAATGACAAATTATCACCACTTTCCTGATTCACATCCTTATAGGGCTCATATGCACCCAATGGCTCACATGTCTCTCGTACATTGGCGTCGTTTCAAAGTTGGTTATGGCAACCAAGTGATGTACAACATGCCTTTCTTGGGTCACCAATTTGGGATGACTTTCGATCCATCCACTACAAGTGTTGAACCTCCACATAGATTGACTCATAAAGATGCATACTTTGGTTATGACCTTCCTCAAATTTCTCCACTTGGAGAAGATATAATTAATAGATCTATCACTACTCATAACGATCTTGGAGGCCTTCAAGGAAATCATTATATAAGGAACCAATAG 726 0.3953 MLGGLFVGDSWDRKLKRKIEELCTMDKDSEELSLSLSLGSNNMVHESSKRKVEESSHFDLKLVENSNNKELIKANEQQFSCKFCCKKFPNSQALGGHQNAHKRERNLFKMNRELSMGTFEAGFDPYPYPSMTNYHHFPDSHPYRAHMHPMAHMSLVHWRRFKVGYGNQVMYNMPFLGHQFGMTFDPSTTSVEPPHRLTHKDAYFGYDLPQISPLGEDIINRSITTHNDLGGLQGNHYIRNQ* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0864 241 Gene3D Classic Zinc Finger 53 118 - -
Lan6g0864 241 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
Lan6g0864 241 ProSitePatterns Zinc finger C2H2 type domain signature. 81 101 IPR013087 -
Lan6g0864 241 PANTHER C2H2-TYPE ZINC FINGER PROTEIN 5 240 - -
Lan6g0864 241 PANTHER ZINC FINGER PROTEIN JAGGED 5 240 IPR045320 GO:0003700
Lan6g0864 241 SUPERFAMILY beta-beta-alpha zinc fingers 75 106 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0864 Lan-Chr6 8055593 8056318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0864 42 175 C2H2 Transcription Factor Family AT5G25160 31.944 3.05e-12 62.4