Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0863 ATGAAGCTGAGAACGGAAATCATAATCCTCATTTCTCATCTATTGGCGTTGTTTTTGTGCTTCACATTTTCTTATTCTTCTTCGGTACCCAGTAACCAATTCCTCGGAATTTCTCCCCAAGATGAAAAATATTACAAGTCTTCTGATATAATAAAATGTAAAGATGGATCTAGAAAATTCACTATACAACAACTCAATGACAATTTCTGTGATTGTCTCGATGGCACCGATGAACCTGGTACATCAGCATGTCCGGGTGGAAAATTTTATTGTCGGAATGCAGGGCATGTTCCTGTTTACCTCTTTTCGTCGAGAGTGAATGATGGAATATGCGACTGTTGTGATGGAACCGATGAATATGATGGTAAAGTGAACTGCCCAAATACTTGCTGGGAGTCTGGGAAAGTTGCTCGAGAGAAGCTGAAGAAAAAGATTGCAACATATCAAGAGGGTGTTAAATTGCGAAAACAAGAAATTGAACAAGCTAAATTAGCTCAGGAGAAGGATCAATCAGAACTTTCAAAACTGAAAAAAGAAGAAAGTACCCTTAAAGGGCTTGTGAAACAGCTGAAGGAGCATAAAGAACAAATAGAGAAGGCAGAGGAGAAGGAGCGTTTACAGAAGGAAGAAGAAGAGAAGCAGAAAAAGGAGGCTGAAGAGAAGGCTAATGGAGGAAATTTTAAATCTGGTGACGAGGATACAGGGCACAGAAATGAAGCTGACAAGCATTTGGATGTTGAAGAAAATGATGTCACAAGTAACCATGATGAAAGTGGAACTCTACATGATTCTTCTGCAGATCAGGTTGAAGCTGGGGACAAGTTAGCAGATGCACATGACAATTATGATGGAGCCAGTGATAGTCCTGGAAGTGAAGGATCTTTGCTTAATGAAGAGGTGCATATTGGAACAGAAGCTGAGGGAGAACCTGATGTTAAATCTGACACCGACATTAAGGTTGAAAAGAAAGAGTCACCTGATGAAACCATCAATAAGGGAGATGATGTATCTGAAAATACTGAGGGATTATCAAAGGAGGAATTGGGCCGGCTTGTTGCTTCTCGGTGGACAGGAGAAAATACTGATAAGCAAAGCGCTGAAGCTGATGCTCCATCAGACAAAGAAGATCAGGAAGATATTCCAAATGAGACAAATAATGAGCAACATGATGGCTATGCTTCTGAAACTGATGATGACAGCAGCAAAGATGAAGATGACGACTTTCGAGAGGACGAGCATGATGACCCTAGTTCCTCTTACAAATCTGAGACTGATGCTGAACCAGACTTGTCAGATGACACAACGGACAATCCTTCTTGGTTAGAGAAAATACAGAAATCTGTGCGGAACATTTTTCATGCTGTTAATTTATTCCAGACTCCAGTGAACCAGACAGATGCTGCTCGTATACGCAAGGAATATGATGAGTCAAGTACCAAGTTGTCTAAAATACAGTCTAGAATATCGAGTCTGACACAAAAGCTAAAACAAGATTTTGGTCCAGCGAAGGAGTTTTATTCATTCTATGATCGTTGCTTTGAGAGCAAGCAGAACAAGTACACTTACAAAGTCTGCCCCTATAAACAGGCTTCTCAGGATGAGGGACATTCTTCCACTCGTTTGGGGAGCTGGGACAAATTTGAGGACTCATACAAAGTAATGGTGTTTGCTAATGGTGATAACTGCTGGAATGGTCCCGATAGGAGCTTGAAGGTCAAGCTAAGATGCGGGTTGAAAAACGAGGTTGCTGATGTTGATGAACCCAGCCGTTGCGAGTATGTAGCTATATTATCTACCCCAGCCCTTTGTCAGGAGGAAAAGCTGAAGGAGTTACAACACAAACTGGAGTTATTGAATTCGGAACAATCTGAAAAACACGATGAGTTGTAA 1890 0.4106 MKLRTEIIILISHLLALFLCFTFSYSSSVPSNQFLGISPQDEKYYKSSDIIKCKDGSRKFTIQQLNDNFCDCLDGTDEPGTSACPGGKFYCRNAGHVPVYLFSSRVNDGICDCCDGTDEYDGKVNCPNTCWESGKVAREKLKKKIATYQEGVKLRKQEIEQAKLAQEKDQSELSKLKKEESTLKGLVKQLKEHKEQIEKAEEKERLQKEEEEKQKKEAEEKANGGNFKSGDEDTGHRNEADKHLDVEENDVTSNHDESGTLHDSSADQVEAGDKLADAHDNYDGASDSPGSEGSLLNEEVHIGTEAEGEPDVKSDTDIKVEKKESPDETINKGDDVSENTEGLSKEELGRLVASRWTGENTDKQSAEADAPSDKEDQEDIPNETNNEQHDGYASETDDDSSKDEDDDFREDEHDDPSSSYKSETDAEPDLSDDTTDNPSWLEKIQKSVRNIFHAVNLFQTPVNQTDAARIRKEYDESSTKLSKIQSRISSLTQKLKQDFGPAKEFYSFYDRCFESKQNKYTYKVCPYKQASQDEGHSSTRLGSWDKFEDSYKVMVFANGDNCWNGPDRSLKVKLRCGLKNEVADVDEPSRCEYVAILSTPALCQEEKLKELQHKLELLNSEQSEKHDEL* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0863 629 Coils Coil 601 629 - -
Lan6g0863 629 MobiDBLite consensus disorder prediction 198 281 - -
Lan6g0863 629 ProSiteProfiles MRH domain profile. 510 605 IPR044865 -
Lan6g0863 629 Gene3D - 505 603 IPR009011 -
Lan6g0863 629 MobiDBLite consensus disorder prediction 302 345 - -
Lan6g0863 629 MobiDBLite consensus disorder prediction 198 438 - -
Lan6g0863 629 Pfam Glucosidase II beta subunit-like 31 183 IPR028146 -
Lan6g0863 629 Pfam Glucosidase II beta subunit-like protein 471 629 IPR036607 -
Lan6g0863 629 Coils Coil 159 228 - -
Lan6g0863 629 PANTHER BNACNNG14010D PROTEIN 9 629 - -
Lan6g0863 629 MobiDBLite consensus disorder prediction 397 412 - -
Lan6g0863 629 MobiDBLite consensus disorder prediction 413 428 - -
Lan6g0863 629 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 9 629 IPR039794 -
Lan6g0863 629 SUPERFAMILY Mannose 6-phosphate receptor domain 514 603 IPR009011 -
Lan6g0863 629 MobiDBLite consensus disorder prediction 366 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0863 Lan-Chr6 8043645 8052954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0863 26 629 Calmodulin-binding Proteins AT5G56360 60.514 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0863 K08288 - gmx:100807083 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0428 18 8292591 8300272 Lan6g0863 6 8043645 8052954 LSH