Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0837 ATGAAGTCAACCATCATCAACACCTTCATCATCTTCATCTTCTTCTTCTTCCAATCATTCATTCTCTCATCTTCTTCAAAATCAACGAATCCATTCCCCAAACAAGCCTTCCCCACAAAATCTGGTTACTTACCAATAAACTCCACTTCAAGTTCCTCCATTTTCTACACTTTCTATGAAGCCCAAAACTCCACTTCACCACTTTCTCAAACCCCTCTTGTTATTTGGCTCCAAGGTGGCCCTGGATGCTCCTCCATGCTTGCCAACTTCTATGAACTTGGTCCCTGGCGTGTCACCAAATCTCTCACCCTTCAACCTAACCCTGGTTCTTGGAACAGGAGATTTGGCCTTCTTTTTCTTGATAATCCCATTGGAAGTGGTTTCAGTATTGCCTCAACACCAGAAGAGATTCCAACAGATCAGAACGGCGTCGCGAAGCACCTTTTTGCTGCTATAACAAGGTTTGTTAAGCTTGATCCTGTTTTCAAGTCTAGGCCTATTTATATAACTGGTGAAAGCTATGCTGGGAAATATGTTCCTGCAATAGGGTATTATATATTGAAGAAAAATGAGAAATTGCATGCTTCTAAGAAAGTGAATTTGGCTGGGTTGGCTATTGGTGATGGGTTAACTGACCCTGTGACCCAAGTGGCTACTCATGCTGCAAATGCTTACTATGTTGGATTGATTAATGAGAGGCAAAGAATTCAGTTGGAGAGTGCTCAGTTAGAAGCGGTTCGATTAACGAAGACGGGGAATTGGAGTGAGGCAGCTGATGCAAGAAATAGAGTATTGCATAAGTTGCAAAGCATAACAGGGCTGGCTACTTTGTATGATTATACAAGGAAAGTTCCATACGAAGATGAATTGGTTGCGCAATTCTTGAACTTACCCGAGGCTAAGAAGGCATTGGGAGTGAATGAATCATTTGCATACGAGCTTTGCAGCGATGTTGTTGGGGCTGCATTACATGCTGATGTGATGAAGAGTGTGAAACATAAGGTGGAGGAGTTAGTGAAGAGGACTAGAGTGTTATTGTACCAAGGTCAGTATGATATAAGGGATGGTGTGGCTCAAGTAGAGGCTTGGGTGAAGACATTGAAATGGGAAGAGATTAACGAGTTTCTGAATGCTAAGAGGAAGATTTGGAAGGTGAATGGAGAAGTTGCAGGGTATGTGCAAAAATGGAAGTCTCTTACCAATGTTGTGGTTTTGGGAGCTGGACATCTTTTACCCACTGATCAGCCTTTGAATTCTCAAGCAATGATAGAAGACTGGGTTTTGGAAAGGGGTTTGTTTCATAGTGTGCAACTTGATAATGTGACAACAAATTCCACTTCCTCTCATTTGTTGTGA 1356 0.4211 MKSTIINTFIIFIFFFFQSFILSSSSKSTNPFPKQAFPTKSGYLPINSTSSSSIFYTFYEAQNSTSPLSQTPLVIWLQGGPGCSSMLANFYELGPWRVTKSLTLQPNPGSWNRRFGLLFLDNPIGSGFSIASTPEEIPTDQNGVAKHLFAAITRFVKLDPVFKSRPIYITGESYAGKYVPAIGYYILKKNEKLHASKKVNLAGLAIGDGLTDPVTQVATHAANAYYVGLINERQRIQLESAQLEAVRLTKTGNWSEAADARNRVLHKLQSITGLATLYDYTRKVPYEDELVAQFLNLPEAKKALGVNESFAYELCSDVVGAALHADVMKSVKHKVEELVKRTRVLLYQGQYDIRDGVAQVEAWVKTLKWEEINEFLNAKRKIWKVNGEVAGYVQKWKSLTNVVVLGAGHLLPTDQPLNSQAMIEDWVLERGLFHSVQLDNVTTNSTSSHLL* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0837 451 PANTHER CARBOXYPEPTIDASE 18 435 - -
Lan6g0837 451 SUPERFAMILY alpha/beta-Hydrolases 36 427 IPR029058 -
Lan6g0837 451 Gene3D alpha/beta hydrolase 19 436 IPR029058 -
Lan6g0837 451 Pfam Serine carboxypeptidase 35 427 IPR001563 GO:0004185|GO:0006508
Lan6g0837 451 ProSitePatterns Serine carboxypeptidases, serine active site. 169 176 IPR018202 GO:0004185
Lan6g0837 451 PRINTS Carboxypeptidase C serine protease (S10) family signature 107 119 IPR001563 GO:0004185|GO:0006508
Lan6g0837 451 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 130 IPR001563 GO:0004185|GO:0006508
Lan6g0837 451 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 180 IPR001563 GO:0004185|GO:0006508
Lan6g0837 451 PRINTS Carboxypeptidase C serine protease (S10) family signature 399 412 IPR001563 GO:0004185|GO:0006508
Lan6g0837 451 Coils Coil 231 251 - -
Lan6g0837 451 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 435 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0837 Lan-Chr6 7740734 7742258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0837 326 427 Calmodulin-binding Proteins AT2G22960 24.272 2.03e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0837 K09645 - gmx:102663282 675.241