Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0831 ATGTCTACCGACGAGATCACTAAGATGGAAGAAGGAGGATCTAGGGAGTCAGGGTTTTGCGGTTCTCCTGAAGTAGTTCAAATCATACAAAAGGTAATTGCAGAGGTGATTGGGACATACTTCTTAGTATTTGCAGGGTGTAGCGTGGTGGTTTTGAATAAATTGGAAGGGAGTAAAGGGACTATAACATTTCCTGGAATTTGTGTAGTATGGGGTCTAACGGTGATGATCTTAGTCTATGCTCTTGGTCACATTTCTGGTGCTCATTTTAATCCCGCAGTCACCGTTAGCTTTGCCATCTATCGTCATTTCCCTTTGAAACAGGTGCCTTTGTATCTTATTGCACAGGTGCTAGGATCTATTCTTGCAAGTGGGACATTGTACCTTCTGTATGATGATTTAGATGAGAATAGTTACTTCGGAACGGTACCAGTAGGAGCTCACTTGAAATCTTTTATCTTAGAGATACTCACTTCATTTCTCTTGATGTTTGTTGTCTCCGCGGTTTCCACAGATAATAGAGCGATTGGAGAATTGGCAGGGATTGCTGTTGGTATGACAGTCTTAATAGATGTCTTCATTGCAGGGCCTGTATCAGGAGCATCCATGAACCCAGCCAGAAGCCTTGGACCTGCAGTGGTGATGCACATTTTCGATGGATTCTGGCTTTATATAGTTGGACCCTTTCTTGGGGCCATACTAGGTGCCTCAGCTTACAACCTAATTAGATTTACTGAGAAACCACTCAGGGAAATTGGTGCAAGCTCAACTATCCTTAAAAGCATGTCCAGAGTTAATACATTTCGGAGATAG 813 0.4268 MSTDEITKMEEGGSRESGFCGSPEVVQIIQKVIAEVIGTYFLVFAGCSVVVLNKLEGSKGTITFPGICVVWGLTVMILVYALGHISGAHFNPAVTVSFAIYRHFPLKQVPLYLIAQVLGSILASGTLYLLYDDLDENSYFGTVPVGAHLKSFILEILTSFLLMFVVSAVSTDNRAIGELAGIAVGMTVLIDVFIAGPVSGASMNPARSLGPAVVMHIFDGFWLYIVGPFLGAILGASAYNLIRFTEKPLREIGASSTILKSMSRVNTFRR* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0831 270 PRINTS Major intrinsic protein family signature 30 49 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0831 270 PRINTS Major intrinsic protein family signature 71 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0831 270 PRINTS Major intrinsic protein family signature 108 127 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0831 270 PRINTS Major intrinsic protein family signature 154 172 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0831 270 PRINTS Major intrinsic protein family signature 185 207 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0831 270 PRINTS Major intrinsic protein family signature 222 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0831 270 PANTHER AQUAPORIN NIP4-1 9 264 - -
Lan6g0831 270 Pfam Major intrinsic protein 26 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0831 270 Gene3D Glycerol uptake facilitator protein. 2 254 IPR023271 -
Lan6g0831 270 CDD MIP 30 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan6g0831 270 SUPERFAMILY Aquaporin-like 27 250 IPR023271 -
Lan6g0831 270 PANTHER AQUAPORIN NIP2-1 9 264 IPR034294 -
Lan6g0831 270 ProSitePatterns MIP family signature. 89 97 IPR022357 -
Lan6g0831 270 TIGRFAM MIP: MIP family channel proteins 34 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0831 Lan-Chr6 7626099 7628742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0831 4 263 Major Intrinsic Protein MIP AT5G37810 59.398 5.08e-112 322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0457 18 8828904 8832112 Lan6g0831 6 7626099 7628742 LSH