Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0827 ATGATGGAACCTGAGACAAAAGGGTCGATGTCATCATATTACAATGTTCTTGGTGTTACTTCAAATTCTTCCATTGAAGAAATAAGACGTACTTATAGGAAGCTTGCAATGCAGTGGCATCCAGATAGGTGGACAAAAACGCCTTCTTTACTTGCTGAAGCCAACCGAAAATTTCAGCAAATTCAAGAAGCCTATTCAGTGTTATCAGACCCCAAGAAAAGAACTTTGTACGACGTAGGCTTGTATGATCCTCAAGAGGAAGAGAATGAGGGCTTCGCTGATTTTGTGGAAGAATTGGTGTCCCTTATGGCTCAAGTTAGGAGTGAGGAAAAGGTTTATGGGTGGGAGGAGTTGCAGTCCATGTTCATGGAAATGGCTAAGGGATTCGAGTATCCTTCAATGTTTGGTGAGGGACCTTCGGTGGTTGATCAATCCGAGTGTTCAAAGAGGAAGCCTTTTGACACAAATGTGGCAGAAAATAAAGGGTCACCTTTTCAAGTTTCTACTTTAGACTTCTATGAAAGAAGAGGTTATTGCAATTAG 543 0.4144 MMEPETKGSMSSYYNVLGVTSNSSIEEIRRTYRKLAMQWHPDRWTKTPSLLAEANRKFQQIQEAYSVLSDPKKRTLYDVGLYDPQEEENEGFADFVEELVSLMAQVRSEEKVYGWEELQSMFMEMAKGFEYPSMFGEGPSVVDQSECSKRKPFDTNVAENKGSPFQVSTLDFYERRGYCN* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0827 180 CDD DnaJ 13 70 IPR001623 -
Lan6g0827 180 Pfam DnaJ domain 13 78 IPR001623 -
Lan6g0827 180 SMART dnaj_3 11 73 IPR001623 -
Lan6g0827 180 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 179 - -
Lan6g0827 180 SUPERFAMILY Chaperone J-domain 9 84 IPR036869 -
Lan6g0827 180 Gene3D DnaJ domain 10 131 IPR036869 -
Lan6g0827 180 PRINTS DnaJ domain signature 14 32 IPR001623 -
Lan6g0827 180 PRINTS DnaJ domain signature 32 47 IPR001623 -
Lan6g0827 180 PRINTS DnaJ domain signature 53 73 IPR001623 -
Lan6g0827 180 PANTHER PUTATIVE, EXPRESSED-RELATED 2 179 - -
Lan6g0827 180 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Lan6g0827 180 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0827 Lan-Chr6 7595543 7597414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0827 2 78 C2H2 Transcription Factor Family AT1G74250 46.154 3.66e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0827 - - gmx:100306079 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0458 18 8832234 8834281 Lan6g0827 6 7595543 7597414 LSH