Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0810 ATGACTACCCCAAGTAAATCTGCATCAATATTATCTTTTCCGTCCTTGGAACCAAAGGGGAAAAATATTCCTGAATCAAGTGCTAACATGCTTCAATGTCCTCTAAACCAACAAACCCTTGTCTCCTCGGAATTGGATGGCCCAGTAGCTATCCTTTGGGATATTGAAAATTGCCCTGTCCCAAGTGATGTCCGCCCTGAAGATGTAGCAGGTAATATAAGGATGGCTTTGCGAGTGCACCCAGTAATTAAAGGAGCTGTATTGCTGTTTTCTGCATATGGTGATTTTAATGCTTTCCCTAGGCGACTTAGAGAAGGCTGTCAGAGGACTGGTGTTAAACTCATTGATGTTCCGAATGGGAGAAAAGATGCTGCCGACAAAGCTATACTGGTTGATATGTTCTTATTTGCTCTTGACAACCCTCCGCCATCCTCTATCATGCTAATATCTGGAGACGTTGACTTTGCTCCAGCACTTCACATTCTTGGTCAGCGGGGATATACTGTAATTCTTGTCATTCCTTCTGGGGTGGGTGTTTCATCTGCCCTATGCAACGCTGGTAAATTTGTTTGGGACTGGCCTAGCGTGGCTCGTGGAGAAGGCTTTGTTCCCCCGTCAAAGGCATTAGTGCCACCTCGTGGAAGTTCAATTGAGCTTGCTGGATATCTAATGGGGTGCCATATCAATGACAACTCTGATGGACAAAATGAAGAAGAAGCAATAGTTTATAGAGGGATGTCACAGAACTATTATAATTCGAGGGATTTCTCAATGGTGTCACAGTCTTTGGCTGAATACAACTGTGGCACATCGAACATGTCATGCTTTCCAACAACTGTGAGATCACATAGCCTTCCATCTGGATCAAATGATGTTTCAGGAGGACATATGCCTTCTAATGACCATAATGAAGGTCTGCTATGGGTACAGCCTGGGGATTTAAATGGTCTCAAGGGCCAGTTAGTAAGGTTGCTTGAACTTTCTGGAGGGCGCATGCCTCTGGCCCGAGTTCCAGCAGAGTACCAGAAAATGTATGGGAAAACACTATATATATCTGATTATGGGGCAATGAAGTTGGTCAATCTTTTCAAGAAGATGGGTGATACACTAGCTGTTGATGGAAAAGGGCAGCGTAAATTTGTGTATCTCAGAAACTTGAAGGCATGCCCAAGTGCACCCCCATTGTTGCTGGCAAGGAAAGACAAGAAAGGAAAGGGGGTCCAGGAAGAGAGTGCAAATGGTTTCAATGGTGGTTGCTCTTCAGACGAGTTATCGGATGAAGAAGGAGCAATCATAGGTGAACATGATGAAAGAAGTTATATAGGAAAGGGTAATCAAGGGAGAGCTGCCAGAAGTGAAATTGGTGACTGTATTCTTGAGCAGTTCAAGTACGAGCTGCAGGAGATTCTAGTAAGCTATTCTTGTCATATATTCATAGGTTGTTTCGAGGCTATATACCAGCAACGGTACAAGAAACAACTTGAATATCAGAGATTTGGCGTGGACAAGTTGGAGGATTTGTTTGAGATTGTGAGTGATGTGGTAGTATTACACGAGGAACCAGTTAGCAAGAGGATGTTCCTGACTGCTGTGGGTGGTTAA 1602 0.4388 MTTPSKSASILSFPSLEPKGKNIPESSANMLQCPLNQQTLVSSELDGPVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVLLFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYTVILVIPSGVGVSSALCNAGKFVWDWPSVARGEGFVPPSKALVPPRGSSIELAGYLMGCHINDNSDGQNEEEAIVYRGMSQNYYNSRDFSMVSQSLAEYNCGTSNMSCFPTTVRSHSLPSGSNDVSGGHMPSNDHNEGLLWVQPGDLNGLKGQLVRLLELSGGRMPLARVPAEYQKMYGKTLYISDYGAMKLVNLFKKMGDTLAVDGKGQRKFVYLRNLKACPSAPPLLLARKDKKGKGVQEESANGFNGGCSSDELSDEEGAIIGEHDERSYIGKGNQGRAARSEIGDCILEQFKYELQEILVSYSCHIFIGCFEAIYQQRYKKQLEYQRFGVDKLEDLFEIVSDVVVLHEEPVSKRMFLTAVGG* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0810 533 ProSiteProfiles OST-type HTH domain profile. 313 385 IPR025605 -
Lan6g0810 533 PANTHER LIMKAIN B LKAP 33 528 IPR024768 GO:0005777|GO:0010468|GO:1903231
Lan6g0810 533 CDD LOTUS 314 383 - -
Lan6g0810 533 Pfam NYN domain 48 187 IPR021139 GO:0004540
Lan6g0810 533 Gene3D - 313 382 IPR041966 -
Lan6g0810 533 Gene3D - 455 531 IPR041966 -
Lan6g0810 533 PANTHER - 33 528 - -
Lan6g0810 533 CDD LOTUS 459 521 - -
Lan6g0810 533 CDD PIN_limkain_b1_N_like 48 174 - -
Lan6g0810 533 Gene3D - 45 194 - -
Lan6g0810 533 ProSiteProfiles OST-type HTH domain profile. 458 532 IPR025605 -
Lan6g0810 533 Pfam OST-HTH/LOTUS domain 315 380 IPR025605 -
Lan6g0810 533 Pfam OST-HTH/LOTUS domain 459 521 IPR025605 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0810 Lan-Chr6 7468219 7471584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0810 45 199 C2H2 Transcription Factor Family AT5G61190 41.935 4.00e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0810 - - gmx:100818186 890.952