Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0801 ACGGTGTACACAGCTGTCACTTCCTTGCCACATCATTTCCAAACCGTATATAAACCCTTCGCCCCTCTTGCTTCATTTCCAAATTCAAAGTCAAACACACAACAACAACAACATCACCTGCTAACAACACCAACAAACATGTCTTACTCTTCAACCCGTCTCACCTCCGAACAAGAACTTTCCGTCATCGTCGCCGCCCTCACCAACGTTGTCACTGGTTCCAGTTCTACTTCCCTTCCCACCACTTCAAATTCTATCCCTCAATTCTTCTCACACCATACATCACAATCCACCGGAGGAACCATCTTTGATCAAAGGATAGTTCCGACAGTGAACTTGGGAACATGCAGTGAATGCAACATTGCCGGGTGCTTAGGCTGCAACTTCTTCCCCGAAGAGAAGAAGAAGCAGAAGTGCATCAAGAAGAAGTACAGGGGAGTGAGGCAGAGGCCATGGGGGAAATGGGCTGCAGAGATTCGTGATCCGAGACGCGCAGCGCGTGTGTGGCTCGGAACATTTAACACGGCTGAGGATGCTGCCAGGGCTTATGACAAAGCCGCCATTGAGTTTCGAGGGCCGCGAGCAAAGCTCAATTTTCCATTGATTGATGATTCGCTAAAAGCACAGGGAGAGAAAGAAAGTGAGAATGTAATGGCTGCAGAAGATGAAGTAGTAGTAAAGGATGAGAATTTGAATAAGGGAAAGGATAAGGAAACGTTTGGGAATAAGGAGAGTGAGTTTTGGGATAGAATTGGAGAAGCTGATTTTCAGCAGCTTATGATGATGATGGATTTTGCTGGAGATTCTTCCCACTCTGCTACGGGGAACACTTTCAGTGGATGA 843 0.4686 TVYTAVTSLPHHFQTVYKPFAPLASFPNSKSNTQQQQHHLLTTPTNMSYSSTRLTSEQELSVIVAALTNVVTGSSSTSLPTTSNSIPQFFSHHTSQSTGGTIFDQRIVPTVNLGTCSECNIAGCLGCNFFPEEKKKQKCIKKKYRGVRQRPWGKWAAEIRDPRRAARVWLGTFNTAEDAARAYDKAAIEFRGPRAKLNFPLIDDSLKAQGEKESENVMAAEDEVVVKDENLNKGKDKETFGNKESEFWDRIGEADFQQLMMMMDFAGDSSHSATGNTFSG* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0801 280 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109 47 275 - -
Lan6g0801 280 Pfam AP2 domain 143 192 IPR001471 GO:0003700|GO:0006355
Lan6g0801 280 Gene3D AP2/ERF domain 142 202 IPR036955 GO:0003700|GO:0006355
Lan6g0801 280 ProSiteProfiles AP2/ERF domain profile. 143 200 IPR001471 GO:0003700|GO:0006355
Lan6g0801 280 PRINTS Ethylene responsive element binding protein signature 144 155 IPR001471 GO:0003700|GO:0006355
Lan6g0801 280 PRINTS Ethylene responsive element binding protein signature 166 182 IPR001471 GO:0003700|GO:0006355
Lan6g0801 280 SUPERFAMILY DNA-binding domain 143 201 IPR016177 GO:0003677
Lan6g0801 280 SMART rav1_2 143 206 IPR001471 GO:0003700|GO:0006355
Lan6g0801 280 CDD AP2 144 200 IPR001471 GO:0003700|GO:0006355
Lan6g0801 280 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 47 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0801 Lan-Chr6 7385714 7386877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0801 26 203 AP2-EREBP Transcription Factor Family AT4G34410 43.458 5.25e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan6g0801 AP2 3.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0801 - - gsj:114420690 299.671