Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0792 ATGGGGGTTTGCACTTCAAAGCCACAGAAACCAAACCCATACGAACTTCGTGAACCAGAAGCTGAAAATGACTCTTATGATCCTCCACAAATCCCAAAAACCCCAGCGACTCCCAACAACCACCGCCGGAAAGATGACGTCATCGCCGGAAAAAAGTCCCCTTTCTTCACCTTCTACAGTCCAAGTCCCGCTCGCTTCCTCAAGAAGTCTCCTGCGCCTTCGGCGGGAGGGAGCAAGAGCGCGAGCTCCACGCCGAGAAGGTTTTTTCGGCGGCCGTTTCCTCCACCGTCTCCGGCCAAGCACATAAAAGCTGTGCTGGCGAGGAGACAGGGGAAGAAGGCCGCTACGGCGATACCGGAGGAGGGTGAGGAGGATGCTGGAGATTTGGATAAGAGATTTGGGTTTTCAAAAGAGTTCAATAGTAAGTTGGAGATTGGGGAAGAAGTTGGTAAAGGGCATTTTGGGTATACTTATTCTGCTAGGTTCAAGAAGGGTGAGCTTAAGGGGCAACAAGTTGCTGTCAAAGTTATCCCAAAAGCTAAGATGACAACAGCAATTGCAATTGAAGATGTGAGAAGGGAGGTGAAAATATTGCGAGCTTTGAATGGACACAACAATCTGGTACAATTTTATGATGCATTTGAAGACCAAGATAGTGTCTACATTGTAATGGAGTTATGTGAAGGGGGAGAGCTTTTAGATAGGATACTATCAAGAGGAGGGAAATACTCAGAAGATGATGCAAAGGCTGTCCTGGTCCAGATACTAAATGTTGTTGCATTTTGCCATCTTCAGGGTGTAGTACACCGAGATCTTAAGCCAGAGAATTTTTTGTATGCTTCAAAGGATGAAAGTTCTGAGTTAAAAGCTATAGACTTTGGGTTGTCAGATTTTGTCAGACCAGATGAAAGGCTTAATGACATTGTTGGAAGTGCATACTATGTGGCCCCTGAAGTTCTCCATAGATCTTACACCACAGAGGCTGATGTGTGGAGTATAGGTGTGATAGCATATATACTTTTATGTGGTAGTCGCCCATTTTGGGCACGAACAGAGTCTGGTATATTTAGAGCAGTTTTGAAAGCTGATCCAAGCTTCGATGAACCTCCTTGGCCTACCTTGTCTACAGAAGCAAAAGATTTTGTCAAACGCCTATTGAATAAGGATCCAAGGAAGCGAATATCTGCTGCACAAGCTCTAAGTCACCCTTGGATACGAAACTACAATAATGTAAAAGTTCCACTTGATATTTTAATATTTAAGCTCATGAAGGTTTATATGCGATCATCATCTTTGCGTAAGGCTGCCTTAAGGGCCTTGTCAAAGACATTGACTACTGATGAACTCTATTATCTGAGGCAACAATTTGCGCTGTTGGAACCAAGCAAAAATGGCAGCATATCCCTAGAGAACATTAACAAGGCCTTAATGAAGTACGCAACAGATGCCATGAAAGAGTCTCGCATCACTGATTTTCTTTCCTCGCTGAATGCATTGCAATATAGAAGAATGGATTTTGAAGAATTTTGTGCAGCTGCATTAAGTGTACATCAGCTTGAAGCTCTCGATCGTTGGGAACAACATGCCCGCTGTGCATATGAACTTTTTGAGAAAGATGGCAACAGGGCTATTATGATTGAAGAACTTGCTTCAGAACTTGGACTTGGTCCTTCTATACCCGTTCATGTTGTTCTTCATGACTGGATCCGGCACACTGATGGGAAGCTAAGCTTTCTTGGGTTTGTCAAATTATTACACGGTGTATCTAGCCGAAATCTCGCGAAGGTTCAATGA 1794 0.4387 MGVCTSKPQKPNPYELREPEAENDSYDPPQIPKTPATPNNHRRKDDVIAGKKSPFFTFYSPSPARFLKKSPAPSAGGSKSASSTPRRFFRRPFPPPSPAKHIKAVLARRQGKKAATAIPEEGEEDAGDLDKRFGFSKEFNSKLEIGEEVGKGHFGYTYSARFKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALNGHNNLVQFYDAFEDQDSVYIVMELCEGGELLDRILSRGGKYSEDDAKAVLVQILNVVAFCHLQGVVHRDLKPENFLYASKDESSELKAIDFGLSDFVRPDERLNDIVGSAYYVAPEVLHRSYTTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEPPWPTLSTEAKDFVKRLLNKDPRKRISAAQALSHPWIRNYNNVKVPLDILIFKLMKVYMRSSSLRKAALRALSKTLTTDELYYLRQQFALLEPSKNGSISLENINKALMKYATDAMKESRITDFLSSLNALQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIMIEELASELGLGPSIPVHVVLHDWIRHTDGKLSFLGFVKLLHGVSSRNLAKVQ* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0792 597 SUPERFAMILY EF-hand 433 587 IPR011992 -
Lan6g0792 597 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 591 - -
Lan6g0792 597 SMART serkin_6 143 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0792 597 Gene3D - 424 514 - -
Lan6g0792 597 CDD STKc_CAMK 144 404 - -
Lan6g0792 597 MobiDBLite consensus disorder prediction 1 95 - -
Lan6g0792 597 SUPERFAMILY Protein kinase-like (PK-like) 140 446 IPR011009 -
Lan6g0792 597 Gene3D Phosphorylase Kinase; domain 1 145 232 - -
Lan6g0792 597 Gene3D Transferase(Phosphotransferase) domain 1 233 423 - -
Lan6g0792 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Lan6g0792 597 ProSiteProfiles Protein kinase domain profile. 143 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0792 597 PANTHER CDPK-RELATED KINASE 2 41 591 - -
Lan6g0792 597 Pfam Protein kinase domain 144 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0792 597 Gene3D - 430 584 - -
Lan6g0792 597 ProSitePatterns Protein kinases ATP-binding region signature. 149 175 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0792 Lan-Chr6 7310580 7316264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0792 1 593 EF-hand Containing Proteins AT3G50530 72.283 0.0 922
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lan6g0792 Pkinase 2.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0792 - K00924 gmx:100798913 1056.2