Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0786 ATGGGTTCGGTTCCTGCAGAACTAAGCTTAGATTTAAGACCCACTTTTGTTCCTAAAACTATCACTGATTTTCTCTCCACTCTCCCTAATTCATCATCCAACAAACTCTCTCTTCTCAACGATTTCATTGCCCGTTTGGAAGATGAATTCAAAAAGATCGATGCTTTCAAACGCGAGCTACCTCTTTCCATGCACCTATTAAACGATGCAATTTCAATTTTGAAGGAAGAATCAGAAAAATGCTTGAGTCATAAATTTCAGCCAGTGCTGGAAGAGTTTATTCCCTTGAAGAAAGAGTGTGATGAGGAGGAGGAAAATAATAACAAGGACAAGGAATGTAGAGATAAGAAGAATTGGATGAGTTCTGTTCAGCTTTGGAACACTACAACAACTACTACTAATAATGTTTATGACCAAAAACATCATAAATTAGACAACAAGAAAAATGAAGATGAAAGGCAATATATGGTTGAGGACCCTTTCCAACCAAGTAGTAGTAGAAATGGAGGAGGAAGAGGGTTTTTACCTTTCTCCTCATACACTTCTATTCCTGTGACAACAATGGTACTGCCACCAACCAAAGAAGAGAAGGAAGACACTGCTATGAATAAACTTTCCCTTTTGACCCCTCCTCCTCCTGTAGTGAAAATTTTGAGGGAGGGATGTAGTTCAAGTGGATCCAGAACCAATTCCAATAGGGCACTTTCCTCCTCTCCTCCTATGGTTCAGCCGAGTTTACGCACCGGATCGCTTCAGCAGCAGCAGCAGCTAGCTTCTAGAAAGCAGAGGAGATGCTGGTCGCCGGAGTTGCACCGTCGATTTGTCAATGCCTTGCAGAAGCTTGGAGGTTCTCAAGTGGCAACACCAAAGCAAATTAGAGAACTCATGCAGGTTGATGGCCTAACAAATGACGAAGTCAAGAGCCATTTACAAAAATACCGACTTCATACACGGAGAGTTCCTTCTTCAAATACTAAGCAGCCCGTTGTAGTTCTGGGAGGTTTGTGGATGTCCCAAGATCAGTACAATGACTCTTCAAAGGGTAGCAGTTCAGTGTCTGGTTCGCCTCAAAGTCCCCTTCAGTTAGCTACAGGGTCCCGGGGAGGGACGGATAGCCTGGAAGATGATGAAGATGCAAAATCCGAGAGTCATAGCTGGAAGATACACATTCACAACAACACTGGAAAAGTTGGTGTATAG 1200 0.4283 MGSVPAELSLDLRPTFVPKTITDFLSTLPNSSSNKLSLLNDFIARLEDEFKKIDAFKRELPLSMHLLNDAISILKEESEKCLSHKFQPVLEEFIPLKKECDEEEENNNKDKECRDKKNWMSSVQLWNTTTTTTNNVYDQKHHKLDNKKNEDERQYMVEDPFQPSSSRNGGGRGFLPFSSYTSIPVTTMVLPPTKEEKEDTAMNKLSLLTPPPPVVKILREGCSSSGSRTNSNRALSSSPPMVQPSLRTGSLQQQQQLASRKQRRCWSPELHRRFVNALQKLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRVPSSNTKQPVVVLGGLWMSQDQYNDSSKGSSSVSGSPQSPLQLATGSRGGTDSLEDDEDAKSESHSWKIHIHNNTGKVGV* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0786 399 Pfam Myb-like DNA-binding domain 263 314 IPR001005 -
Lan6g0786 399 MobiDBLite consensus disorder prediction 342 399 - -
Lan6g0786 399 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 261 316 IPR006447 GO:0003677
Lan6g0786 399 MobiDBLite consensus disorder prediction 219 247 - -
Lan6g0786 399 SUPERFAMILY Homeodomain-like 259 319 IPR009057 -
Lan6g0786 399 MobiDBLite consensus disorder prediction 222 247 - -
Lan6g0786 399 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 258 318 IPR017930 -
Lan6g0786 399 MobiDBLite consensus disorder prediction 370 389 - -
Lan6g0786 399 Gene3D - 260 318 - -
Lan6g0786 399 PANTHER TRANSCRIPTION FACTOR HHO6 7 391 - -
Lan6g0786 399 MobiDBLite consensus disorder prediction 342 368 - -
Lan6g0786 399 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 7 391 IPR044787 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0786 Lan-Chr6 7269628 7272771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0786 6 337 G2-like Transcription Factor Family AT2G03500 40.223 9.02e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan6g0786 Myb_DNA-binding 3.6e-07 CL0123