Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0776 ATGGAAAAGAAAGGGTGTTGCTTTGCTGGAATAGATAGGGTTTTCACACATCACTCCAAGAAAAAGCAGGATTCAGATAATAAAAGTACAAAAGAGCAGAAGAAAGGAAAACTAAGGCATGGAGAAACCAAATCATTCATCCCCCTCTTCAGAGAGCCAAGCAGCATTGAGAAAATCTTTGGGGAGTTTGAAAGAGAGCAACAAATACTTACTGTTAGGCCTCCTACCCCTCCGGAGCAACCTAAAACATCGCCTTTTGTCCCCCCTAGAGATGCTTCTCCACGACCTACGTCTCCCAGACCTCCATCTCCAAGGGGTGCTTCTCCCAGGGCTCCTTCTCCACAACTGACCTCTCCTAAGGCAGCATCTTCCCATATTGTTCATATCCCCAAGGAGGTTGGCTACAGAGCCGAACCAACTCTAACGAATCAGCATGCCTCTGCAACTAAGATACAGGCTGCTTTAAGAGGTTATATGGCCAGGAGGAGTTTTAGAGCTATAAAGGGTTTGGTGAGACTTCAAGGAGTGGTTAGAGGACAGAATGTAAAGAGGCAGACGGTTAATGCCATGAAACACATGCAGCTTTTGGTGCGAGTTCAGTCTCAAATTCAATCACGAAGGACCCAGCTGCTAGAAAACCAGGCACGATATCAAGCTGAGTTCAAGAATGACAACGCGAGTACCTTGGGCAAATTGTCTGAGGCACATGGAGACTGGGATGATAGCTTACTGACAAAAGAGGAAATAGAGGCAAGGTTGCAGAGGAAAGTGGAAGCAGTCCTCAAAAGAGAAAGAGAAATGGCATTTGCATATTCACATCAGTTGTGGAAAGGCTCTCCAAAATCAAATCAAACCCCAATAACAGATATGCGATCCGGAAGATTTCCGTGGTGGTGGAAATGGTTGGAAAGACAACTGCCAGAAACATCAAATTCACAAGAAAGACAAGTCTTAAAGAATTCCCAACTTACACCTCCTAGACCACACTCAGAACAGAAAACTAGTCCAAGACCAACCTCAAGCACTTCTATGCAGCATCATTTTGCCAATGATAATATGGACACTCCTACCCCAAAATCCACTAAATCAACTATAGTGACATATTCAAAGCCACCAAGAACTCCTCCTTACAGAACTCCACAACCCAACAGCTCAAAATATTCAAGGCCAAGAGCTATAGGAGCACATTCACCTTTTGATGTTGCAATGAAAGATGATGAAAGTCTCACTAGCTGCCCTCCATTTTCAGTGCCAAACTACATGGCTCCAACAGCTTCTACTAAGGCGAAAGTGCGCGCTAGTAGTAATCCAAGAGAAAGGTTTGGTGGGACTCCAACAAGTGAATCATCAAAGAGGAGATCTTCTTTTCCTTTGTCACAAGCCAGTGGATCACTGTTGTCAAGCAAGGATTCTAGCTCTAAGAGGGTACCAGATAAATATGGGTCACTTGAATCTTTAGGAAACATGAGTGTGAATTCCATAGTGTCTATGCCTGCAGCAGTGGGGAGAAAGCCTTTTACAAGATTTGTGTGA 1533 0.4423 MEKKGCCFAGIDRVFTHHSKKKQDSDNKSTKEQKKGKLRHGETKSFIPLFREPSSIEKIFGEFEREQQILTVRPPTPPEQPKTSPFVPPRDASPRPTSPRPPSPRGASPRAPSPQLTSPKAASSHIVHIPKEVGYRAEPTLTNQHASATKIQAALRGYMARRSFRAIKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRTQLLENQARYQAEFKNDNASTLGKLSEAHGDWDDSLLTKEEIEARLQRKVEAVLKREREMAFAYSHQLWKGSPKSNQTPITDMRSGRFPWWWKWLERQLPETSNSQERQVLKNSQLTPPRPHSEQKTSPRPTSSTSMQHHFANDNMDTPTPKSTKSTIVTYSKPPRTPPYRTPQPNSSKYSRPRAIGAHSPFDVAMKDDESLTSCPPFSVPNYMAPTASTKAKVRASSNPRERFGGTPTSESSKRRSSFPLSQASGSLLSSKDSSSKRVPDKYGSLESLGNMSVNSIVSMPAAVGRKPFTRFV* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0776 510 MobiDBLite consensus disorder prediction 14 46 - -
Lan6g0776 510 SMART iq_5 143 165 IPR000048 GO:0005515
Lan6g0776 510 MobiDBLite consensus disorder prediction 439 471 - -
Lan6g0776 510 PANTHER IQ-DOMAIN 5-RELATED 1 507 - -
Lan6g0776 510 MobiDBLite consensus disorder prediction 1 124 - -
Lan6g0776 510 MobiDBLite consensus disorder prediction 425 485 - -
Lan6g0776 510 MobiDBLite consensus disorder prediction 74 109 - -
Lan6g0776 510 Pfam IQ calmodulin-binding motif 145 165 IPR000048 GO:0005515
Lan6g0776 510 Pfam Protein of unknown function (DUF4005) 380 471 IPR025064 -
Lan6g0776 510 MobiDBLite consensus disorder prediction 309 392 - -
Lan6g0776 510 ProSiteProfiles IQ motif profile. 144 172 IPR000048 GO:0005515
Lan6g0776 510 PANTHER IQ-DOMAIN 13 1 507 - -
Lan6g0776 510 MobiDBLite consensus disorder prediction 309 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0776 Lan-Chr6 7161070 7166207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0776 1 509 IQD Protein Family AT3G59690 50.635 5.18e-151 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0776 - - lang:109331805 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0776 6 7161070 7166207 Lan18g0509 18 9752446 9757719 LSH
Lan6g0776 6 7161070 7166207 Lan17g0710 17 6367754 6372648 LSH